Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00904 ATGTTTGACTCTGGTCCAAAGTCAGAATACATGGGTGGCCAGCGGGATAATTTTTTGAGGTTTGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCTGGAGTTATAAAATCTGGATTTAGTATTGATAAATTAGGCCATGGTGGTCATGGAAGCAGCACAACTTCTAGATCTTTTAAAAGGGGAATGAGAAGGGGATCTGAAGGACTGAAATCAATTGGGCGATCACTTGGCTTGGGAGTATCTAGGGCAGTGTTCCCGGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGATAAATTTCTGCTCTTATGGAATAAACTTTTTGTTATCTCATGCATTTTGGCTGTGTCTGTAGATCCACTGTTTTTCTATCTCCCAGTCGTTAATGATTCATTTCAGCTGCCTTGGCATAGACCGAAAGTTGGCAACAATAGTTACAACCTTAAGGACAGTGATTGA 474 0.4008 MFDSGPKSEYMGGQRDNFLRFEALDSTLSSSSDAGVIKSGFSIDKLGHGGHGSSTTSRSFKRGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVVNDSFQLPWHRPKVGNNSYNLKDSD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00904 157 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00904 Pumo-Chr4 11768048 11769160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00904 1 135 Ion Channels AT2G23980 63.194 1.96e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00904 K05391 - gmx:100784309 244.973