Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00902 ATGGCTTCACGTTTACCAAATGCATCTCCATTTTTTGTCATGCTCTCAATGTGCCTCTTAATTTCCACCTCTGAAGCCGAAAAATATGTGGTTGGAGGCAGTCATAATTCCTGGAAGTTTCCTCTCTCAAAACCAGATTCACTCACCCACTGGGCCAGCTCTCACCAATTCAAAATCGGCGACACTCTCATATTTAAATACGATGAGAGAACAGAATCAGTGCACGAAGTGAATGAGACGGATTACGAAGGGTGCAACACGGTGGGGAAAGAACACGTGGTGTTCAACGATGGCAACACCAAGGTGACGCTTACCAAATCTGGACTCAGACACTTCATAAGTGGAAATCAGAGTCATTGCCAGATGGGGTTAAAGCTCGCTGTGGAGGTTGTCATGTCTAACAAAACCAAAAAGAAGCTTCATTCCCCATCTCCTTCACCTTCACCATCACCATCACCATCACCATCACCATCACCTTCACCTTCACCAATATTGCCATCATCATCACCTTCACCACTTCCAAATAATCAAGGTGTTACTCGTAGTTCAGGCGCTGGATTCATCAAAGTTATGATGTGGTTGGGGGTGATGATGTTTTTGGTTTAA 606 0.4455 MASRLPNASPFFVMLSMCLLISTSEAEKYVVGGSHNSWKFPLSKPDSLTHWASSHQFKIGDTLIFKYDERTESVHEVNETDYEGCNTVGKEHVVFNDGNTKVTLTKSGLRHFISGNQSHCQMGLKLAVEVVMSNKTKKKLHSPSPSPSPSPSPSPSPSPSPSPILPSSSPSPLPNNQGVTRSSGAGFIKVMMWLGVMMFLV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00902 201 MobiDBLite consensus disorder prediction 135 178 - -
Pumo4g00902 201 ProSiteProfiles Phytocyanin domain profile. 27 132 IPR003245 GO:0009055
Pumo4g00902 201 MobiDBLite consensus disorder prediction 144 170 - -
Pumo4g00902 201 Gene3D - 24 134 IPR008972 -
Pumo4g00902 201 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Pumo4g00902 201 PANTHER BLUE COPPER PROTEIN 28 146 IPR039391 GO:0009055
Pumo4g00902 201 Pfam Plastocyanin-like domain 38 123 IPR003245 GO:0009055
Pumo4g00902 201 CDD Phytocyanin 29 130 - -
Pumo4g00902 201 FunFam Early nodulin-like protein 1 26 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00902 Pumo-Chr4 11759841 11761172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00902 8 164 Phytocyanin Superfamily AT4G31840 35.000 4.00e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00902 - - gmx:547770 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00902 4 11759841 11761172 Pumo4g00902 4 11759841 11761172 ECH