Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00859 ATGGGTGGTTTAGCTGAGAATCTTCCTCTAATTGTTATGATAGGTCTGCAAATTCATTATGCAGCACTTGCCATCTTCACAAGAGCCGCTCTGTTAGATGGGTTGAGTACAACGGTCTTTGTAGTGTACAGGCAAGGCATAGCCACTTTGGCTTTGGCGCCTATGTTTTTCTCTTCTAAGAGGAGACAATCAGTAAGAGATTCTTTGGGATTCAGGAGCTTCTTTTTGATGTTTGTGACGGCTCTTGTTGGAGTCACAGCAAATCAGAATGCATACTTTAGAGGTTTATACTATTCTTCTTCTACTGCAGCTACTGCCATGAGTAATCTGATACCTGCATTAACGTTTGTAATAGCAGCAATTGCAGGATTTGAGAAAATTGATGTAAGCTTAAGAAGCACGGCCAAGATATTAGGGACAGTTTGTTGCGTCAGTGGAGCCTTAACCATGGCATTGGTCAAAGGACAGAAGCTGTTACACACGGAGTTCCTTCCTTCTATACATCTCACTGGCAGTGAAGGTGACGATTGGCTGCTGGGTTGTCTATTGCTCTTAGCAAGTAGTGTTTTCTGGTCTTGTTGGATGATCCTGCAGGTACCAATCGCTTCGTGCTGCCCAGACCATTTATTATCAACATTTTGGATGTGTCTCTTTTCAACAATACAGTCTGCCCTATTTGCCCTACTTTCAGAGCCGGATCTTCAAGCATGGATTTTACAATCACCGTTACAGATTTCATGTTCTTTATATGCAGGAATCGGAATAGCGATTAGTTTCTTCATTCAATCCTGGTGCATCTCAGAAAGAGGTCCCTTGTACTGTGCAATGTTCAATCCTTTAGCAACAGTCATCACTGCTCTGATAAGTGCAACATTCCTTCAGGAAGAGGTATACGTTGGAAGTTTGGTTGGGGCTGTTGGAGTTATTGCTGGTTTATATATTGTGCTTTGGGGTAAAGCCAAAGAGTTTGCTGAGATTAAACCAGAGGCACCACAAGCAAACTTGCAAGATGATGAGATAAATAGTAGGATAGATTTGGAACAACCCCTTCTATCAGAGAAATCTGAACATGTAACAGAAGCAGATAGCAAGGTGTAG 1098 0.4217 MGGLAENLPLIVMIGLQIHYAALAIFTRAALLDGLSTTVFVVYRQGIATLALAPMFFSSKRRQSVRDSLGFRSFFLMFVTALVGVTANQNAYFRGLYYSSSTAATAMSNLIPALTFVIAAIAGFEKIDVSLRSTAKILGTVCCVSGALTMALVKGQKLLHTEFLPSIHLTGSEGDDWLLGCLLLLASSVFWSCWMILQVPIASCCPDHLLSTFWMCLFSTIQSALFALLSEPDLQAWILQSPLQISCSLYAGIGIAISFFIQSWCISERGPLYCAMFNPLATVITALISATFLQEEVYVGSLVGAVGVIAGLYIVLWGKAKEFAEIKPEAPQANLQDDEINSRIDLEQPLLSEKSEHVTEADSKV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00859 365 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Pumo4g00859 365 Pfam EamA-like transporter family 179 316 IPR000620 GO:0016020
Pumo4g00859 365 PANTHER WAT1-RELATED PROTEIN 9 323 IPR030184 GO:0016020|GO:0022857
Pumo4g00859 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Pumo4g00859 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00859 Pumo-Chr4 11310151 11312957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00859 1 355 Nodulin-like Gene Family AT4G30420 43.733 8.27e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00859 - - gmx:100817369 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00859 4 11310151 11312957 Pumo4g00859 4 11310151 11312957 ECH