Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00855 ATGCGAAAAATCAACTCATTGAAGCAAGAATTCCTGAAGAAATGGATATGGGGTCTCAGAAAATATTGCTCTCAGAAGAAGAACATGAGTCTGTTGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTAGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAGGGCCCTTATTGCGAATGCTTCAAGAGATGGCAACAACAACGTGTTAGCAGGCTCTTCATCATCTCCACCACCACAGAGGGTAATAAGGAAAAGCTTCACAAGGATGAGAAGCTGCAGCAGAAACATGTTGAGAAGAAACCGTGCATCAGTCCACAGAACAAAGGATAGGGTGGTGGCGAGTTTCATTGCCAAGAGGCTGGTCCAGAAGAGAATGCGAAGGCTCAAGAGTCTCTTACCTGGTGGAGAATCCATGGACGATGTGTCTTTGGTTGAAGAAACCCTAGATTATGTACAATCACTGCGAGCTCAAGTTGAAGTAATGAGATGTCTTGTCACTGCCTCAGAGCTCATGATCCTAAATCCATCAAGGGGTGGAGAAAATTAA 558 0.4498 MRKINSLKQEFLKKWIWGLRKYCSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSRALIANASRDGNNNVLAGSSSSPPPQRVIRKSFTRMRSCSRNMLRRNRASVHRTKDRVVASFIAKRLVQKRMRRLKSLLPGGESMDDVSLVEETLDYVQSLRAQVEVMRCLVTASELMILNPSRGGEN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00855 185 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 170 IPR044660 GO:0006355
Pumo4g00855 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 171 IPR036638 GO:0046983
Pumo4g00855 185 CDD bHLH_AtIBH1_like 122 169 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00855 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 43.017 9.68e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00855 - - gmx:100809722 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00855 4 11248696 11250037 Pumo4g00855 4 11248696 11250037 ECH