LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g00839	ATGGCTAAGTGCTTCTCATCCCTTCTCTCTTGGTTTCTGATTTTTTTGCTTGTGCTGCTACACACACAAAAGGGGAATGGGTCAAATGCAACACCGGAGTCGGAAGTGATCAAGTTCAGAGTAGGGGTACCCAAGAAAGATGGTTTCCGCCAATTTGTGAATGTAGTTTGGGACTCTCGTGAACAAAAGTACAACGTATCTGGATATTGCATAGAAGTTTTCAATGCCGTTGTAAACCTTTTACCTTTCAAGGTTTCGCTAGATATTGTAACTTATGATGTTGAATCAAGTGACAGTTCTGGAGCTGGATCATACGATTCACTTCTCCAACAAATCCCAACAAAGGCATTCCCTTTAAACTCCAATCTCACGGCTTGCTTTTCGAGAGCCATCTTGAAGGTGACTGAAAGTAAGTTAATGAATGAAATTGAGGAAAAATATTTTGGAAAGAATGATATTGGAGGAGAAGATCTGTCTGCGGAAATTTCTTCCGCTACTCCAAGCCTCAACTTTCATAGCTTTGCAGGGCTGTTCTTGATCACCGGAATAGCTACTTTATTAGCGCTATTAGTCTCAGAAACTGTTATATGGCAAAAGCCCATTTTGATAGCTAAAACATACAGTCAGAGGTATTTGTTCACCACTCCACCTTCTGCAAAAACAAGTGTTCATCCAACTCATGATTCAAATCACAGAATAGAGGTCGTTTAA	711	0.4023	MAKCFSSLLSWFLIFLLVLLHTQKGNGSNATPESEVIKFRVGVPKKDGFRQFVNVVWDSREQKYNVSGYCIEVFNAVVNLLPFKVSLDIVTYDVESSDSSGAGSYDSLLQQIPTKAFPLNSNLTACFSRAILKVTESKLMNEIEEKYFGKNDIGGEDLSAEISSATPSLNFHSFAGLFLITGIATLLALLVSETVIWQKPILIAKTYSQRYLFTTPPSAKTSVHPTHDSNHRIEVV	236

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g00839	236	Gene3D	-	33	119	-	-
	Pumo4g00839	236	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	116	199	IPR015683	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo4g00839	Pumo-Chr4	11028396	11030698	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo4g00839	116	216	Ion Channels	AT5G11210	33.333	1.27e-07	50.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g00839	K05387		-	gmx:100783907	198.364