Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00837 ATGGCTAAGTGCTTCTCATTCCTTCTCTCTCGTTTTCTGATCTTTTTGCTTGTGCTGCTACAGACACCAACGGGGAATGGGTCAAATGCAATCAAGTTGAGAGTAGGAGTACCCAAGAAAGACGGTTTCCGCCAATTTGTGGATGTAGTTTGGGACCCTCGGGAAAACAAGTACAACGTATCTGGATATTGCATGGATGTTTTCGAAGCCGTTGTAACCCGCTTACCTTTCAATGTTTCTCTACATGTTCAACAACCTTATGGTATTGAATCAAGTGAGATTTCTGGAACATACGATTCACTTCTCCAACAGATCCCAGCAAAGCTGTATGATGTTGTGGTAGGGGATGTAACAATCTTGGCCAACCGCTCGAATTTCGTAGATTTCACACTGCCATATACTGGATCGGGAGTTAAAATGTTAGTACCAGTTCAACATGGGAGACAACAGACCATGTGGATTTTTGTGAAACCCTTCAGCTGGGATCTTTGGTTGAGCATAGTCATCATCTCTACCTTTATAGGGGTTGCCATACTCATCATGGAAAGGAATGTAAATGCTCTTCCTGATCAGGAGGGTTCGCAAAATCGAACAAAGCTTAGCCCTGCAACCATCTTATGGTTTCCAATTTCTCAAGCCATTCTCCCTGAAAAAATTGAAGAAAAATATTTTGGGAAGAATGATGATATTGGAGGAGAAGACCCGTCTGCGCAAATGTCTTCTGCTACTCTAAGTCTCAACTTTCATAGCTTTGCAGGGCTATTCTTGATTACAGGGATTTCTACTTTATTAGCGCTATTGATCTCAGAAACTGTTATATGGCAAAGACCCATTTTGATGGCTAAAGCATACAGTCAGAGGTATTTGTTTCCCAGTACTCCACCTTCCACAGAAACACGCGTTCATCCAACTCAAGATTCAACACACGGAATAGAGGCCGTTTAA 945 0.4222 MAKCFSFLLSRFLIFLLVLLQTPTGNGSNAIKLRVGVPKKDGFRQFVDVVWDPRENKYNVSGYCMDVFEAVVTRLPFNVSLHVQQPYGIESSEISGTYDSLLQQIPAKLYDVVVGDVTILANRSNFVDFTLPYTGSGVKMLVPVQHGRQQTMWIFVKPFSWDLWLSIVIISTFIGVAILIMERNVNALPDQEGSQNRTKLSPATILWFPISQAILPEKIEEKYFGKNDDIGGEDPSAQMSSATLSLNFHSFAGLFLITGISTLLALLISETVIWQRPILMAKAYSQRYLFPSTPPSTETRVHPTQDSTHGIEAV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00837 314 MobiDBLite consensus disorder prediction 294 314 - -
Pumo4g00837 314 FunFam Glutamate receptor 2.7 28 151 - -
Pumo4g00837 314 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 217 276 IPR015683 -
Pumo4g00837 314 SMART GluR_14 32 276 IPR001320 GO:0015276|GO:0016020
Pumo4g00837 314 Pfam Ligated ion channel L-glutamate- and glycine-binding site 56 143 IPR019594 GO:0004970|GO:0016020
Pumo4g00837 314 Gene3D - 28 151 - -
Pumo4g00837 314 Gene3D - 152 271 - -
Pumo4g00837 314 SUPERFAMILY Periplasmic binding protein-like II 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00837 Pumo-Chr4 11010820 11012816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00837 28 225 Ion Channels AT2G24720 38.384 1.81e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00837 K05387 - gmx:100807817 362.459