Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00821 ATGTGTAATAAAGGGTTTCAATGCTTGAGCCAGTGTGAGAGTGTAATTGATCATAGGCAACAATTCATCATGGATAGTCCTATTCGATCGCCGGCCACCGGTTCGGGTTCCGGTGAAGATAACCGGCGTGTTAAATTCTTGTGCAGCTTTCTGGGGAGCATAATGCCTCGCCCCCAAGATGGGAAGCTGCGTTATGTTGGGGGCGAGACGCGAATTGTGAGTGTTCTGAGGGATATTAGCTATGAGGAGTTGATGGGGAAGATGAGAGAGCTGTATGATGGGGCTGCTGTGTTGAAGTACCAGCAGCCTGATGAGGATCTTGATGCTCTTGTCTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAGGAGTATGACAAGTTGGGGTCAGGGGATGGATTCACTAGGCTCAGGATTTTTCTGTTTTCGCAATCCGAGCAGGATGGTTCCTCACTTTTCATTGATGGGGATGATTCTGAGAGGAGGTATGTTGATGCATTGAATAGTTTGAATGATGGTTCTGACTTTAGGAGGTTGCAACAAGGGGAGGTTCCTATGATTAGCCCTGTTGAGGATATCCATGTGGCTGCTGATCAGTTCTATAACCCAATCAGTGTGGAAAGTGGGATTCATAGTCAGAGAAGTGGGGACCTATCTATGTCGCCGTATAATATGCATCATCTCACGGTCCAGCACCCGCAAACTATGGGCCAGAGATATAATGAAATGGATGCTCCTTGGAATCCTGCCTATTTCTCTCCTAGGCATCATGGTCTCCATGAATTTCCATCTTCTCCTTCTGGTACAAGGTACCGAGTGCCATTTCCTGAGTTACCAGATAAGTGCATTGATAGAGTGCCGGAAGAGTTTGCGCGACATCATGTAAATCATCATCCTGTGTACGACAATCAACCGCAATATTCTGAAAATGTTATGTGGGTGCCGACCGGAGCAGCACATGGTGAAAAGTCTGGTTTTCCAGGCAATATTCTTCATGGTCCCCATGTTCTTGATGGGAACAGTATATGCGAGCAGTGTCGCATGGGTTTTCATAGAGGTCAACCACATCTGGAGCATTCTAATATAAGCAATGGACTTCCACCGGTTGCTAATCCATGTGCAGAATGCCCACCAAATAGGGATACTTTCACAGTGAATGCTGATGCAAAGTTACATCCCGCAATCTATCCCAATGAACCTAATAATGATCATAGGTCTGTTTATAATGATACTCAGAATCATGAGAGAGGATGGGGTTTGCAGCATCCAACTGCTCGGGTTGAGGAATCAAGAGGACTTGTCTCTGGATCTGGAAGAATGAGTGATGTTCCTGTTGCAAATTTCTCTCTTGGGCATGGTAGTATGACTGATGGGCATAACTTGTCTTCCAATTATGTTCACCAGCAGGCTGGACCTGAATTGGGGCCCGAACTGTTCCCTGACCAAACCGTGACTTCTATACCACATATACAAATTCCTCCACTGGAAGAGTGCAATGTGCGGTATGGAAATTCACCTTCTCCTTATGGAGTAGATAGTAATTACGGTGTGCCTCGTGGACATCCACCTGGTTTCTGGAGAAACACTCCAGTTCCTGTTCATATTGGACCATCTTATGAGGCAGCTACTTCACCTAAGCCGGTCAATGGTATGATAAATGCGGGATTAATCAGGGGAGAGGGCAGTCCAGGATTTTTCATTGGACCAGATAGTCAAAGTCATTGGGTTGATTCCTCACAGAAATTGACAGGACATGATGGTACAGCCATCCCAGAATGTCCCTATGCACATGCTCTGAATCCATTGCCCCCTGGTCAAGAAAATCAACTCCCAGTTACTGTAGATACCATTCATCCCCCACAGGACATGAATGCTGGTACCTGCTTGGAACCCGTGCAGCTGCCAAAATCATCTTTTAAAGTTCACAATCAACAGGTTTTAAGAGATGATACTCATTTGACTGAAGCAAAGACTTTTGAATCTAATAGTTTGCTTGGTGAAGGAATAGTGGTAAAAATTGAGGACCAGGTTGAAAACTCTGATGCGCAGACTATATCTTTTTCAGAGCAAAATAAAATTGCTGAGAATGCATGCAAAGCTGCTGCTTCTGTTGATTCTAAGAATTTGAAGTCAAAACCTGAAGCAGACTGCAGGCATGTTGAGAAACTGGCTGATAAGGACCCTTCTGTTCCAGAAGATTCTAAACATTTAGCTGATCAATTCAGCTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTAGAAGGTGCTGAGGAGGTGAAAGCTGCAGCTGATGAGCATGCCAATTCTCAGAATCACAATTCAGATACCAAAGATGAAACTACAAATGAAGTAGAACCAGCGAATGCTCATGGTGATTTAGAATTGGACTCTGAAAATGACCATGTAGATACTTCTAAAATTGAGCCTACAAGGGCTGAGGAAGAAGCAATTGCTAAGGGATTGCAGACTATTAAAAATGATGATTTGGAGGAGATCCGTGAGCTTGGTTCTGGAACCTATGGAGCTGTTTATCATGGGAAATGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCAAGATTGATTGCAGATTTCTGGAAGGAGGCATTGATGTTGAGTTCATTGCATCATCCAAATGTTGTCTCCTTTTATGGCATTGTTCGTGATGGCCCCGATGGTTCTTTAGCAACAGTCACAGAGTTCATGATTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATAGATCGTCGTAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAAAACATTGTGCATTTTGATTTGAAATGCGAGAATCTATTGGTCAATATGAGAGATCCTCAACGGCCTATTTGCAAGATTGGTGATTTGGGTTTATCAAAGGTTAAACAGCACACTCTAGTGTCTGGTGGAGTACGGGGTACTTTGCCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTCTACTCATTTGGAATAGTCATGTGGGAATTACTCACAGGGAATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTTAACAACACTTTACGTCCTCAAATCCCAACATGGTGTGATCCTGAGTGGAAATCTCTAATGGAAAGTTGTTGGGCTTCTGATCCTGTAGAAAGGCCATCGTTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATGTGAAATAG 3321 0.4351 MCNKGFQCLSQCESVIDHRQQFIMDSPIRSPATGSGSGEDNRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVLRDISYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSSLFIDGDDSERRYVDALNSLNDGSDFRRLQQGEVPMISPVEDIHVAADQFYNPISVESGIHSQRSGDLSMSPYNMHHLTVQHPQTMGQRYNEMDAPWNPAYFSPRHHGLHEFPSSPSGTRYRVPFPELPDKCIDRVPEEFARHHVNHHPVYDNQPQYSENVMWVPTGAAHGEKSGFPGNILHGPHVLDGNSICEQCRMGFHRGQPHLEHSNISNGLPPVANPCAECPPNRDTFTVNADAKLHPAIYPNEPNNDHRSVYNDTQNHERGWGLQHPTARVEESRGLVSGSGRMSDVPVANFSLGHGSMTDGHNLSSNYVHQQAGPELGPELFPDQTVTSIPHIQIPPLEECNVRYGNSPSPYGVDSNYGVPRGHPPGFWRNTPVPVHIGPSYEAATSPKPVNGMINAGLIRGEGSPGFFIGPDSQSHWVDSSQKLTGHDGTAIPECPYAHALNPLPPGQENQLPVTVDTIHPPQDMNAGTCLEPVQLPKSSFKVHNQQVLRDDTHLTEAKTFESNSLLGEGIVVKIEDQVENSDAQTISFSEQNKIAENACKAAASVDSKNLKSKPEADCRHVEKLADKDPSVPEDSKHLADQFSFLPELIASVKKAALEGAEEVKAAADEHANSQNHNSDTKDETTNEVEPANAHGDLELDSENDHVDTSKIEPTRAEEEAIAKGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPICKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGNEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPVERPSFSEISKKLRSMAASMNVK 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00821 1106 SMART PB1_new 58 143 IPR000270 GO:0005515
Pumo4g00821 1106 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Pumo4g00821 1106 PANTHER SERINE-THREONINE PROTEIN KINASE 110 1099 - -
Pumo4g00821 1106 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 826 920 - -
Pumo4g00821 1106 Gene3D Phosphorylase Kinase; domain 1 819 918 - -
Pumo4g00821 1106 Gene3D - 62 146 - -
Pumo4g00821 1106 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 921 1106 - -
Pumo4g00821 1106 Gene3D Transferase(Phosphotransferase) domain 1 919 1106 - -
Pumo4g00821 1106 SMART serkin_6 833 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00821 1106 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 63 145 - -
Pumo4g00821 1106 MobiDBLite consensus disorder prediction 763 817 - -
Pumo4g00821 1106 CDD PB1_UP2 47 143 - -
Pumo4g00821 1106 PRINTS Tyrosine kinase catalytic domain signature 1023 1045 IPR001245 GO:0004672|GO:0006468
Pumo4g00821 1106 PRINTS Tyrosine kinase catalytic domain signature 952 970 IPR001245 GO:0004672|GO:0006468
Pumo4g00821 1106 PRINTS Tyrosine kinase catalytic domain signature 1067 1089 IPR001245 GO:0004672|GO:0006468
Pumo4g00821 1106 PRINTS Tyrosine kinase catalytic domain signature 915 928 IPR001245 GO:0004672|GO:0006468
Pumo4g00821 1106 ProSitePatterns Protein kinases ATP-binding region signature. 839 860 IPR017441 GO:0005524
Pumo4g00821 1106 ProSiteProfiles Protein kinase domain profile. 833 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00821 1106 Pfam Protein tyrosine and serine/threonine kinase 834 1096 IPR001245 GO:0004672|GO:0006468
Pumo4g00821 1106 CDD STKc_MAP3K-like 839 1096 - -
Pumo4g00821 1106 SUPERFAMILY CAD & PB1 domains 60 150 - -
Pumo4g00821 1106 Pfam PB1 domain 59 144 IPR000270 GO:0005515
Pumo4g00821 1106 SUPERFAMILY Protein kinase-like (PK-like) 825 1094 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00821 Pumo-Chr4 10785530 10792386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00821 43 1106 MAP Kinase Kinase Kinase AT5G57610 54.578 0.0 1056
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pumo4g00821 PK_Tyr_Ser-Thr 2.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00821 - - gmx:100779077 2110.49