Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00803 ATGGAAGAGCACAAATCTACACAACACCACCACCACGACTTCATTTTCCGTTCCAAACTCCCTGACATTTACATCCCAACGCACCTCCCTCTCCACACTTACATATTCGAAAACCTCTCCCAATTCAAAGACCGTCCCTGCCTCATCAACGCCGCCACCGGAGAGACATTCACCTACGCCGCCGTTGAACTCACCGCCCGCAAAGTCGCCGCCGGACTCAACAAACTTGGCATCGAAAAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCCCCAGTTCGTCTTCGCATTCCTCGGCGCCTCCTACCGCGGCGCCACCGTCACCACCGCCAACCCCTTCTACACTCCGGCGGAGGTGGCGAAACAAGCCACGGCGTCCAACTCCAAACTCATCATAACCCAAGCGTCCTACGTGGACAAAGTCAAGGATTTCGTGAGAGAAAACGACGTCAAGGTGATGTGCATTGACGCTGCGCCGGAAGGATACCTTCACTTCTCGGAGTTAACGGAGGCAGACGAGGGAGACATTCCCGCCTTTAAAATATCTCCAGACGACGTCGTTGCGCTGCCGTATTCGTCTGGCACCACGGGGCTCCCCAAGGGAGTTATGCTAACGCACAAGGGACTCGTTACGAGCGTGGCGCAACAGGTTGACGGAGAGAACCCGAATCTGTATTTTCGAAGCGACGATGTGGTGGTGTGTGTGCTCCCACTTTTCCACATTTATTCGCTCAACTCTGTTTTGCTCTGTTCCCTTCGAGTTGGGGCTGCCGTTTTGATCATGCCCAAATTTGAGGTCGTTTCGTTGCTGGAGTTGGTCCAGAAACACAAGGTGAGCGTCGCGCCGTTTGTGCCGCCCATTGTTTTGGCCATTGCTAAGAGTTCGGATGTGGAGCGATACGACCTGTCGTCGATTCGGATGATCTTGTCTGGCGCCGCACCCATGGGAAAGGAACTCGAGGATTCTATGAGAACCAAACTTCCCAACGCCACACTTGGTCAGGGTTACGGGATGACAGAGGCAGGACCAGTGCTTTCAATGTGCTTAGCGTTTGCGAAGGAGCCAATGCAGGTGAAATCAGGTGCGTGCGGGACCGTCGTAAGAAATGCGGAGATGAAGATCGTTGACCCTCAAACTGGTGCTTCGCTTCATAGGAATCAAGCCGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTAAATGACAAAGAGGCCACAGAAAGAACAACTAGATAA 1248 0.5337 MEEHKSTQHHHHDFIFRSKLPDIYIPTHLPLHTYIFENLSQFKDRPCLINAATGETFTYAAVELTARKVAAGLNKLGIEKGDVILLLLQNCPQFVFAFLGASYRGATVTTANPFYTPAEVAKQATASNSKLIITQASYVDKVKDFVRENDVKVMCIDAAPEGYLHFSELTEADEGDIPAFKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFRSDDVVVCVLPLFHIYSLNSVLLCSLRVGAAVLIMPKFEVVSLLELVQKHKVSVAPFVPPIVLAIAKSSDVERYDLSSIRMILSGAAPMGKELEDSMRTKLPNATLGQGYGMTEAGPVLSMCLAFAKEPMQVKSGACGTVVRNAEMKIVDPQTGASLHRNQAGEICIRGNQIMKGYLNDKEATERTTR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00803 415 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Pumo4g00803 415 Pfam AMP-binding enzyme 37 413 IPR000873 -
Pumo4g00803 415 SUPERFAMILY Acetyl-CoA synthetase-like 9 413 - -
Pumo4g00803 415 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 415 - -
Pumo4g00803 415 Gene3D - 6 415 IPR042099 -
Pumo4g00803 415 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00803 Pumo-Chr4 10489524 10496532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00803 4 413 Monolignol Biosynthesis Gene Families AT1G51680 68.735 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00803 K01904 - gmx:100779668 759.985