Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00795 ATGGATACTGATGAGGACTGTTCAATTGTTCTTGAATTATCTGAAAGAGATCCTTTCTTTGACAACAAGAAGAAATTACTACAAAGTAAAGGCTTTAGTCCCAAAGAACGGATATACCTCAGGAGCTCTTCAAAACCTGGCTGGATGAATGCTACTGTGGAGGTGATACTTCAGATTGCACGAATCATACAATTAAATGAGCTGGAACTTTATTTTGCTGAAGATGATGTATGCACATCTATAGAGTTTTACAGTCCCAGGAACGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCACCGACATATCACTTTCTACTTGTACACATCTCCATACGAATATCCTCCAAGGGTTACGCCAAACAATTCTTGATTTAATTTCTGGTTTTGGGGACAAAAACAGTGTGAAGGGAGTAGTTGAAAAAAACCACAGTTGTGACCAAGAAGAACGCCTGATAGAATGGGGTGAAAGCAATGGTGTAACCACACAGTTAAAAATAGCTTATATTGAAGGAGCCGGTCGGGGTGCAATAGCAAGGAAAGATCTAAAAGTTGGAGACATTGCTTTGGAAATTCCTGTGTCCATTATCATTTCCGAGGAGCTTGTGCATGAAACTGATATGTACGGTGTCTTAAAAGATATTGATGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAACTGTGATTCAAAATTCAAAATTTACTTTGACACACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTGAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCACTTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTGTGCAATAGTTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATAATGTATTCTGATGGAAAGCTAAGAACATGCTTGATCCCTATTGCTGGCTTTCTTAATCACTCACTGTGCCCACATGTTATGCACTATGGCAAAGTGGATCCTGCAACAAATTCACTGAAATTTTGTCTATCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGGAACTTCTCCAGCTCTCATCTAATTACCTTTTATGGTTTCTTACCACAAGGAGACAACCCGTATGATGTTATTCCGTTAGACATCGACGGTTCTGACGTTGATTCTAATGAGGATATACCTGTGTCCAACTGGACGACTCACATGGTGCGTGGTACCTGGCTCTCCAAGGATTACAGGATATTCTACTATGGCCTTCCCTCTCCATTATTGGACCATCTTAGGAGATCTCGAAGTCCCATGCTGCGAACGAAGACTTTTTTGCAAGGAAGCTTGGAAAATGAGCTTGAAGTTCTTGAAAATCTCAAAGATATCTTTGATGATATGGTGGAAAATATGGGCGAGATCGATCTTGATAACAGAGAAAACTGCAGTTGGGATGAAAAATTGGCCATGGATTTTAAAAATATACAAAGACGAATTGCCTATTCTGTTTCAACTTCGTGTCACACTGGTATGGACATGTTGAAGAACGAACTATGCAAGTGCATGGCTGAGGACATCCTAGGCTAA 1650 0.397 MDTDEDCSIVLELSERDPFFDNKKKLLQSKGFSPKERIYLRSSSKPGWMNATVEVILQIARIIQLNELELYFAEDDVCTSIEFYSPRNELEALNSIVLLTDISLSTCTHLHTNILQGLRQTILDLISGFGDKNSVKGVVEKNHSCDQEERLIEWGESNGVTTQLKIAYIEGAGRGAIARKDLKVGDIALEIPVSIIISEELVHETDMYGVLKDIDGISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFSIEAITMLDGTLLLEEIMQARQHLHAQYDELFPALCNSFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPATNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIDGSDVDSNEDIPVSNWTTHMVRGTWLSKDYRIFYYGLPSPLLDHLRRSRSPMLRTKTFLQGSLENELEVLENLKDIFDDMVENMGEIDLDNRENCSWDEKLAMDFKNIQRRIAYSVSTSCHTGMDMLKNELCKCMAEDILG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00795 549 Gene3D set domain protein methyltransferase, domain 1 112 393 - -
Pumo4g00795 549 FunFam SET domain-containing protein 4 142 - -
Pumo4g00795 549 CDD SET_LSMT 164 394 - -
Pumo4g00795 549 SUPERFAMILY SET domain 148 401 IPR046341 -
Pumo4g00795 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 136 486 - -
Pumo4g00795 549 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Pumo4g00795 549 Pfam SET domain 173 380 IPR001214 GO:0005515
Pumo4g00795 549 FunFam Transcription factor, E2F and DP-related 146 394 - -
Pumo4g00795 549 Gene3D - 2 111 IPR036464 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo4g00795 SET 3.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00795 K19199 - gmx:100778605 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00795 4 10400601 10407838 Pumo4g00795 4 10400601 10407838 ECH