Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00771 ATGGAAGGGCAAGTAGCTAAGCGCAGACGTGTATACTCCATGGAACCAAACCAAATAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCGGCGTTGGTGAAGATAAAGGAAAAGGGTTCTATAGAAGATAGCAGCCATTGCGATATTAACAATGCTGTCAAGTATGAAGTGGACATGGCAATGGTATTGTCAGCCCAAGGTTTTGCATGGAGTAACGGCCTTAAAGTCAAGCTTCAAAGCGATCATGTTCATGTCAATGCAGCAGCTAAAAGCACTAGGTTTCTTGAAAATGAGGCTGGTGAAGGTTCATCAAAAGTTTATGACAAAAATGAACTTGTCCCAATGGAGTTCTCTTCAAACCCTAGCTCAAAGTCACAGGTGGAGATTTTAGAGAGCAAATCTAAGTGCAAGGACTTGTCAGAAATGAAAAGGGATTTAGCCAGAGAAGATGATAAGGATGAGGACATCAACAACCAGTTGAAGAGGCTCAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTGATGATGAACAAATGGTTTCAGAGCTTGAGAGTTACATAGGCTGTTTGCAAATGCAGGTGAACGCTCTCCAGTTTCTGCTGCCACAGACGCGTTAA 630 0.419 MEGQVAKRRRVYSMEPNQIVQSIFTRNYLNHLVPALVKIKEKGSIEDSSHCDINNAVKYEVDMAMVLSAQGFAWSNGLKVKLQSDHVHVNAAAKSTRFLENEAGEGSSKVYDKNELVPMEFSSNPSSKSQVEILESKSKCKDLSEMKRDLAREDDKDEDINNQLKRLRRLIPGGEEMCDDEQMVSELESYIGCLQMQVNALQFLLPQTR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00771 209 CDD bHLH_AtIBH1_like 152 205 IPR044549 GO:0006355
Pumo4g00771 209 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 204 IPR044660 GO:0006355
Pumo4g00771 209 Coils Coil 150 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00771 Pumo-Chr4 10099942 10101360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00771 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 46.988 3.99e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00771 - - gmx:100775329 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00771 4 10099942 10101360 Pumo2g01559 2 29206677 29207751 PCT