Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00758 ATGGAGAAGGCAGAGAAAAATATGCAGAAGAGCTACTTTGATGTCTTGGGTTTATGCTGTTCCTCGGAGGTTCCTCTTATTGAAAACATCTTGAAACCTCTCGAAGGAATCAAAGAGGTTTCAGTCATCGTTCCATCACGAACTGTCATTGTTGTCCATGATACTCTTGTCATTTCGCAACTTCAAATTGTTAAGGCACTGAATCAAGCAAGACTAGAAGCAAATATCAGAGTGTATGGGGACGAAAAGCACCAAAAGAGATGGCCAAGCCCTTACTCAATTGCCTCTGGTGTCCTACTTTTGCTTTCACTTCTCAAATTTGTGTTCCATCCCTTAAAATATTTGGCACTAGGAGCAGTTGCTGTGGGGGCCTACCCAATCATCTTAAAGACCATTGTCTCCATTCGGAACCTTAGGCTGGACATTAACATTCTCATGCTCATAGCAGTTATTGGGACAATTGCTATGAATGATTATTTGGAAGCTGGCACCATTGTTTTCCTCTTCTCAATTGCAGAATGGCTAGAGTCAAGGGCAAGTCACAAGGCAAATGCAGTAATGTCATCTTTGATGAACATAGCCCCTCAAAAAGCAGTCATAGCTGAAACAGGAGAGGTTGTGGAAGCTGATGAGGTGAAAATAAACACCATTTTAGCAGTTAAAGCAGGTGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGAACCTGTGAAGTTGATGAGAAAACATTGACTGGGGAATCATTCCCTGTGGCAAAACAAAAGGATTCTACTGTATGGGCTGGCACCATCAATTTAAATGGTTATATTAGTGTGAAAACTACTGCACTAGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTTGAAGAAGCCCAAAACAGCAAAACCAGCATTCAGAGATTGATTGACAAGTTTGCCAAGTTTTATACCCCAGCCGTTGTAATCATATCAACTCTTGTAGCGGTGATTCCAGTGGCATTAAAAAGGCCTAACGAGAAACACTGGCTTCACTTTGCACTGGTTGTTTTAGTAAGTGCATGTCCATGCGCACTCATCCTTTCAACGCCAGTTGCAACTTTTTGTGCTTACACCAAAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTGATCATCTTGAAACACTTGCAAAAATTAAGGTCATGGCCTTTGACAAAACGGGTACCATAACCAAGGGTGAATTTGTGGTGACACATTTTCAATCTATTTCAGATGACATTGATTTGAACACATTGATTTACTGGGTGTCAAGTGTAGAGAGCAAGTCAGGCCATCCATTGGCATCAGCCATTGTTGATTATGGAAGGTCTCTCTCCGTTGAACCGGAGCCAGAAAAGGTGACAGAATTTGAAAATTTTCCTGGAGAAGGAATATGTGGGAAAATTGAAGACAGAGTTATTTACATTGGAAATAAAAAAATTGCCGCAAGAGCTGGGTCTGAAACAGTTCCAATCTTACAAGGTGAAGTTGAAAGAGGAAAGACCACTGGATACATATACTCGGGAGCAACCTCAGTTGGATTTTTCTCTCTTTCAGATGCCTGCAGATTAGGGGTTCAGGAGGCAATAGGGCAGTTGAAGTCAATGGGAATCAAAACCGCTATGCTCACTGGAGACAGTCAATCTGCTGCAATGCAAGCACAGGAGCAGCTGGGGCATTCTCTGGAGTTAGTACATGCAGAACTTTTGCCAGAGGACAAGGTGAAAATCATCTCAGAATTTAAGAAGGAAGGTCCAACAGCCATGATTGGAGATGGTTTAAACGATGCGCCGGCATTAGCTGCAGCTGATATTGGAATCTCAATGGGCATTTCAGGTTCTGCATTGGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGACATTAGGAAGATACCAGAAGCCATTAAGCTTGCAAGAAAAGCTCGTAGGAAAGTGGTAGAAAACATTGTTTTGTCAATCATGACTAAGGCTGCGATTCTTGGTTTGGCCATTGGTGGTCATCCACTTGTTTGGGCAGCAGTTGTTGCTGATGTTGGAACATGTCTATTGGTCATCTTTAACAGCATGTTACTTCTGCGAAGAGGACACAACCATGGAGGAAAATGTTGTAGATCTTCCACTAAATCACATACCCACAAAAATGGATGTGGTGGCACTCATGGTAGTTCCTCTCATCATCACCATCATCATCATGAGCATGATCAACATCAACATCAACATGAGCATGATCAACATCAACATCATAGCCACAAGCGTTGTTGCTCAGACAAGACAAAAAAGATGTCTCAACCTCATAAATGTGGCGGCGCTCATGGTAGTTCCTCTCATCATCATCATCAACATCAACATGAGCATGATCAACACAATCAACATGAACATGATAGCCATAATCAACACGGTCAACATGAACATGATAGCCATAATCATCATGATCAACATCAACATCCTCACAAGTGTGCCTCCCAGACGAGTTCCTCAACATGTCCATCCTGCTCTTCAAATCCAAGTTTAGGTGGAATTGTTAACCATTGCAACACCATGAAGGGTCGTGATCAATGTAAAGGAAGTGACGAAATCCATGAACATGATCATTCTCATCATGGAAGATGTGACAAGAATCAAGATGGAGTCCACAAGCATGATACTGAAAACGAGGGTTGTTCAGATTCACACAATTTGATTCTAAATGCAGAAGATAATCATGCGGTTGCAACAAACAGGCATGGTAGTTGTTTGGGACATAAGGCCCATGGGACAGAACACTGCCACAACCAAAATTCTGACATGGTTACTCATGATAGTGCTTCACATAGTTCTCCTTGCCACCTCAATCTCTCCTGTCAAAAAGAAAGCCAACAATTTACTCATAACCATTGCCACCTGATCCATGGTTGTGAAAATCTGAAAGACCATGAATCCAAAGATGTTTTAAGATCCAACCATGACATTCATCATGAAAAATCAGGTTGTCATTCTGATTTTGAGAAGCATGGGACAGGTGAAATATCCATTGACATCATCCATGAGCATGTTGAATCAGCCTCAATGCATGGTTGTTCAAGTTTGGAAGAGAAAGAAAAAGGTTCCTGCTGTGAAGGCTGCTCAGACACATGTGACAAATTGCCTGCTGTGTGTGGCTGTGAGAGTTCAAATGAGAGAGAAGGTGGTGCATGTTGCAGAAATGAGGACTCTTCAAAAGAATGCAAGGAATCTCCGATTATGCATGTTTGCCATAGTTTAAATAAGAGAGAAGTTGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGCCAAACTTGGTCACTCAAGAGCTGGTTTTGTAGGATGTTTGTCAGAAATTATTACAGAATAG 3363 0.419 MEKAEKNMQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDTLVISQLQIVKALNQARLEANIRVYGDEKHQKRWPSPYSIASGVLLLLSLLKFVFHPLKYLALGAVAVGAYPIILKTIVSIRNLRLDINILMLIAVIGTIAMNDYLEAGTIVFLFSIAEWLESRASHKANAVMSSLMNIAPQKAVIAETGEVVEADEVKINTILAVKAGEVIPIDGVVLDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKTSIQRLIDKFAKFYTPAVVIISTLVAVIPVALKRPNEKHWLHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGDHLETLAKIKVMAFDKTGTITKGEFVVTHFQSISDDIDLNTLIYWVSSVESKSGHPLASAIVDYGRSLSVEPEPEKVTEFENFPGEGICGKIEDRVIYIGNKKIAARAGSETVPILQGEVERGKTTGYIYSGATSVGFFSLSDACRLGVQEAIGQLKSMGIKTAMLTGDSQSAAMQAQEQLGHSLELVHAELLPEDKVKIISEFKKEGPTAMIGDGLNDAPALAAADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKARRKVVENIVLSIMTKAAILGLAIGGHPLVWAAVVADVGTCLLVIFNSMLLLRRGHNHGGKCCRSSTKSHTHKNGCGGTHGSSSHHHHHHHEHDQHQHQHEHDQHQHHSHKRCCSDKTKKMSQPHKCGGAHGSSSHHHHQHQHEHDQHNQHEHDSHNQHGQHEHDSHNHHDQHQHPHKCASQTSSSTCPSCSSNPSLGGIVNHCNTMKGRDQCKGSDEIHEHDHSHHGRCDKNQDGVHKHDTENEGCSDSHNLILNAEDNHAVATNRHGSCLGHKAHGTEHCHNQNSDMVTHDSASHSSPCHLNLSCQKESQQFTHNHCHLIHGCENLKDHESKDVLRSNHDIHHEKSGCHSDFEKHGTGEISIDIIHEHVESASMHGCSSLEEKEKGSCCEGCSDTCDKLPAVCGCESSNEREGGACCRNEDSSKECKESPIMHVCHSLNKREVGGCCKSYMKECCAKLGHSRAGFVGCLSEIITE 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00758 1120 Gene3D - 382 642 IPR023214 -
Pumo4g00758 1120 FunFam Putative cadmium/zinc-transporting ATPase 3 5 78 - -
Pumo4g00758 1120 FunFam Copper-transporting ATPase 1, putative 180 294 - -
Pumo4g00758 1120 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 697 - -
Pumo4g00758 1120 Pfam haloacid dehalogenase-like hydrolase 387 605 - -
Pumo4g00758 1120 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 385 IPR023298 -
Pumo4g00758 1120 FunFam Putative cadmium/zinc-transporting ATPase 3 402 523 - -
Pumo4g00758 1120 NCBIfam cadmium family heavy metal-translocating P-type ATPase 142 483 - -
Pumo4g00758 1120 NCBIfam heavy metal translocating P-type ATPase 142 694 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pumo4g00758 1120 SFLD C1.7: P-type atpase like 374 643 - -
Pumo4g00758 1120 PRINTS Copper-transporting ATPase signature 313 327 - -
Pumo4g00758 1120 PRINTS Copper-transporting ATPase signature 182 200 - -
Pumo4g00758 1120 PRINTS Copper-transporting ATPase signature 626 640 - -
Pumo4g00758 1120 PRINTS Copper-transporting ATPase signature 569 586 - -
Pumo4g00758 1120 MobiDBLite consensus disorder prediction 854 889 - -
Pumo4g00758 1120 ProSitePatterns Hypothetical cof family signature 2. 591 613 - -
Pumo4g00758 1120 ProSitePatterns E1-E2 ATPases phosphorylation site. 393 399 IPR018303 -
Pumo4g00758 1120 SFLD p-type atpase 374 643 IPR044492 -
Pumo4g00758 1120 Gene3D - 180 294 - -
Pumo4g00758 1120 Gene3D - 402 523 IPR023299 GO:0000166
Pumo4g00758 1120 Gene3D - 5 78 - -
Pumo4g00758 1120 Coils Coil 286 306 - -
Pumo4g00758 1120 SUPERFAMILY HMA, heavy metal-associated domain 6 75 IPR036163 GO:0046872
Pumo4g00758 1120 ProSiteProfiles Heavy-metal-associated domain profile. 9 75 IPR006121 GO:0046872
Pumo4g00758 1120 MobiDBLite consensus disorder prediction 788 820 - -
Pumo4g00758 1120 NCBIfam HAD-IC family P-type ATPase 165 668 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo4g00758 1120 SUPERFAMILY HAD-like 390 692 IPR036412 -
Pumo4g00758 1120 MobiDBLite consensus disorder prediction 702 828 - -
Pumo4g00758 1120 SUPERFAMILY Calcium ATPase, transduction domain A 205 290 IPR008250 -
Pumo4g00758 1120 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Pumo4g00758 1120 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Pumo4g00758 1120 PRINTS P-type cation-transporting ATPase superfamily signature 391 405 - -
Pumo4g00758 1120 PRINTS P-type cation-transporting ATPase superfamily signature 537 547 - -
Pumo4g00758 1120 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Pumo4g00758 1120 CDD P-type_ATPase_HM 115 693 - -
Pumo4g00758 1120 Pfam E1-E2 ATPase 201 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00758 Pumo-Chr4 9885922 9896302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00758 4 816 Primary Pumps ATPases AT4G30110 61.447 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00758 K01534 - gmx:100817567 1859.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00758 4 9885922 9896302 Pumo4g00758 4 9885922 9896302 ECH