Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00743 ATGTTGAAATTGAATTACGACGATATTCGGAACACTTGGTCTGACCGCGGAACACCGTTCGCAGTCGATAGCCCCCTCGCCGACGTGCCGGACAATGACGTCACTGCACGGCTGTCGCAAATTGATTTGTTGTGGGACAATGGAGGAGTGAGAGAAGCTAGCGTGATGCGCTACAAGGAGAAGCGGCGAACGCGCCTCTTCTCGAAGAAGATCAGGTACCAGGTTAGGAAAGTCAACGCAAATCAACGACCCAGAATGAATGTACGAGTCAGTTGA 276 0.5145 MLKLNYDDIRNTWSDRGTPFAVDSPLADVPDNDVTARLSQIDLLWDNGGVREASVMRYKEKRRTRLFSKKIRYQVRKVNANQRPRMNVRVS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00743 91 ProSiteProfiles CCT domain profile. 51 91 IPR010402 GO:0005515
Pumo4g00743 91 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 89 - -
Pumo4g00743 91 Pfam CCT motif 51 89 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00743 Pumo-Chr4 9703685 9704526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00743 1 89 C2C2-CO-like Transcription Factor Family AT1G25440 41.818 7.90e-19 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo4g00743 CCT 2e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00743 - - gmx:100784788 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00743 4 9703685 9704526 Pumo4g00743 4 9703685 9704526 ECH
Pumo4g00743 4 9703685 9704526 Pumo2g01595 2 29968325 29982895 PCT