Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00702 ATGGGGGTGGTTTTGGCCTTGATGCTGCAGCTGCTGAAGCTCTGCATCATTGCCTTTGCTGTGACAGCTCAAGAATCCAAAGCATTTCTTCCTGTCATTCCTCCTAGAGCAGAAACACTTGGTCCTATATATCATGGAGAGGGAAGTGAAGCACCAAACCTACCATCAGATGGAGATGGGTTTGTTATATCCCCATCTCCGGCTAACTTACATGTGTATCATTCCCCTATCTCTCCAGCAGTACCAAATGATTTTCATGATCCAGGTACATTCTCTCAGCCTCCAAAGACATTACCATCTCCTACAGCAGCTCCATCCCCTCAGAAGATTAAAGACATTGAACCGTCCAAATCTCCAAGTCCAAGCACTATAGCATTGTCACCACCATACGAGGTTGTTCCTTCACCAGCAGCAGTTCAAAGGAACAAGCCTCCATCTGTTAAAAGAAGTCCACCTCAAAGGGAAGCACCTGCTGTTAGGCCTCCTGTCTCTACACCAACTGCTCCAGCTCCAGTTGCAATATCTTCTGGCAAATCACCAAAAACTTCACCAGTCAGCCAACCAATTGAACGTGGAAACTTGGCACCTAATGTTGATAATAGGAATGCAAATAGGAGTCACCCTGCAGAGCCATTTTCCCCAGCACCAGGTGCAATGCCTTCTTCTAATTTGCCCAAAAATTCATCAGGTAGCCAACCAACTGAACATGGAACTTTTCCTCCTAAAGAGGGTACAAATAAAGGTCACAGTCCAGAATCAATTTCACCAGCCCCTATAGCAGTTAATTTGCCAAAAGAATCACCTGTCAGCCAGCCTCCTGAACATGGAAGTTTGCCACCAATTGTTCATCAAGGGAATGCAAATATGGGTCACAACTTGAAGCCTGTTTCACCAGCCTCAGTTGCTAAACCTCCCACAACTTACAAAATAAAATCAATGGACAGTGAACCAACACAGAATGGAAGCATTACACCTAATGTTCATAAAAGCAATACAAATAAAGGTCTCACTTCTGAGCCAGTTTCACCAGAAACTGTTGCATCCCCACCATGGAAAGTGGAAAATAACCCACCAGAGGCCCACCCTATTGTCCCAACAATAACTCCATCCATATTACCTGCACCAGTTACATCACCTCCAAGTGCATTTCCATTAAAACCACCATTGGTCCATCCAATTGTTCCAGTAGCATCTCCATCAGAATTACCAGCACCAGTTGCCTCTCCCACTCCCTTGAGAAGCATCAATTGGAAGAAAGGTGGAGCACCAGTTGTTGCACCTTTGTCCAGAAATCCAAAGCCACTTCCAGCTGTAATACACTCCCCTGCTCAAGCTCCTGGAGCACAAAAAGCAAGGCAATTACATCATGCTCCCGAGCCATTGATTTCGTCTCCTACATCTTCTTCCAATAAAGAATATCGTTCTCCTGCATTGACACCTTCATCCTCATTTTATAAACATCCTCATACAAGGGAGATAATTAGCAGCCCTGCTCCTGCATCATCATCTATGGTTTCTCCTCCCACTTCAAAACACCAAGAAGAAGCAATTCCTCCCTTATTGCCACCAAGAAGTGGACAAAGACATCATATTCCACCACCAATGAACTCAAGTTCTTCAGTTTCCCCATTCTCTTCCCCTATTCATTCAAACATGGGCCAAGTTTCACCTGCTCCTTCTCCATCAATCAAATTTGCATCTCACCCAACTGGAATACCTCCATCCGAGTCTTCTTCCAAGAGACCTAAGATGCCTCTCCTGCCTCAAGTTCAAGCGCTGCCGCCCCCACCTCCTAATGAAGATTGTATATCAACTGTCTGCACAGAACCTTATACAAATTCTCCGCCTGGAGAACCTTGCAGATGTGTCTGGCCAATGCGAGTTGGTCTTCGCCTTAGTGTTTCTCTTTATACCTTCTTCCCTTTGGTTTCAGAACTAGCTTCTGAAATTGCCACTGGGGTTTTCATGAAACAAAGTCAAGTTCGCATTATGGGAGCAAATGCAGCAGACCAACAACCTGAGAAAACTGTTGTCCTTATTGATTTGGTGCCATTTGGGGAAGAGTTTGATAATACTACGGCCTTTTTGACTTCTGACAGATTTTGGCACAAAAAAGTTCAGATAAAGGCTTTCTACTTTGGAGAATATGACGTGTTATATGTGAGTTATCCAGGTTTACCTCCTTCTCCTCCTTTACCTCCTTCAAGCCTTAACATGTTCAATGGTGGTCCATATTCAAATGATGGCAATAATGGAAGGACAATAAAGCCTTTTGGGGTTGACATACAGAAGAGACGGCATAAAGGTGGACTTAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTCTTTAGCAGTTGTTTTATGTGCTGCTGCTGCTTGGGTCATGTTCAAGTTCAGAGATCATGTTAATCAGCCAGCATCAACTCCACAGCAGCTTTCGCCACCTTCTCTTACCAAAGAACCAGGCACTGCTGGATCACTTAGAGGTGGGGGAGTTGGTTCTCTTTCCACATCATTTCGATCTAGCATGGCTGCTTATACAGGATCTGCTAAGACTTTCAGTACGAATGACATTGAGAAAGCTACTGATAATTTCAATGCTTCAAGAATACTTGGAGAAGGCGGTTTTGGGCTTGTTTACAGTGGTATCCTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTAAAGAGGGAGGACCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAGATGCTCAGTCGTCTTCACCATAGAAATTTGGTGAAGTTAATTGGTATATGTATCGAAGACAGCTTCCGCTGCTTGGTTTATGAACTCGTTCCAAATGGAAGCGTGAAATCCCATTTACATGGGGTTGACAGGGAAAACAGCCCCCTTGATTGGGGTGCCCGGATGAAGATAGCTCTTGGAGCAGCTCGTGGTCTAGCTTATCTGCATGAAGATTCAAGTCCCCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCCAAAGTATCTGATTTTGGATTGGCTCGAACAGCAACAGATGAGGAGAACAAACACATATCAACACGCGTCATGGGAACTTTTGGTTACGTGGCACCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACTGGAAGAAAACCTGTAGACATGTCACAAGCTCCTGGTCAAGAGAATCTTGTCGCTTGGGCTCGTCCACTTCTGACAAGTAAAGAAGGATGTGAAGCAATGATAGACCCATCTCTAGGAGCTGATGTGCCTTTTGACAGTGTGGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAACCAGAGGTATCAAACCGTCCCTTCATGGGTGAGGTTGTGCAGGCTTTGAAACTTGTATGTAATGAATGCGATGAAGCAAAAGAAGAAGCAGGCTCCAGAAGTTCTAGCCAGGAGGAGGATTGGTCTGTTGTTTTAGATTTGGGAATCAGCAATGTTTCTGGTGAGCTACCAGAGAATTTCCAAAGCCAATTCTCGTCTACTAACTTTGATTCTGGAGTTGATATTGAAAGAGGCTTGGCAGCATCAGAACTGTTCAGTTCATCAGCAAGATTTGGCAGGGTGGAGTCTGGATCATTTAGAAGAAATTCTTATTCAGGTCCGCTGAGAACCGGAAGAAGCCGGCGGTTGTGGCAGATAATTAGGAGTCTTTCTAGTGGCAGTGTCAGTGAACATGGAACTATGCTAAAGTTATGA 3786 0.4437 MGVVLALMLQLLKLCIIAFAVTAQESKAFLPVIPPRAETLGPIYHGEGSEAPNLPSDGDGFVISPSPANLHVYHSPISPAVPNDFHDPGTFSQPPKTLPSPTAAPSPQKIKDIEPSKSPSPSTIALSPPYEVVPSPAAVQRNKPPSVKRSPPQREAPAVRPPVSTPTAPAPVAISSGKSPKTSPVSQPIERGNLAPNVDNRNANRSHPAEPFSPAPGAMPSSNLPKNSSGSQPTEHGTFPPKEGTNKGHSPESISPAPIAVNLPKESPVSQPPEHGSLPPIVHQGNANMGHNLKPVSPASVAKPPTTYKIKSMDSEPTQNGSITPNVHKSNTNKGLTSEPVSPETVASPPWKVENNPPEAHPIVPTITPSILPAPVTSPPSAFPLKPPLVHPIVPVASPSELPAPVASPTPLRSINWKKGGAPVVAPLSRNPKPLPAVIHSPAQAPGAQKARQLHHAPEPLISSPTSSSNKEYRSPALTPSSSFYKHPHTREIISSPAPASSSMVSPPTSKHQEEAIPPLLPPRSGQRHHIPPPMNSSSSVSPFSSPIHSNMGQVSPAPSPSIKFASHPTGIPPSESSSKRPKMPLLPQVQALPPPPPNEDCISTVCTEPYTNSPPGEPCRCVWPMRVGLRLSVSLYTFFPLVSELASEIATGVFMKQSQVRIMGANAADQQPEKTVVLIDLVPFGEEFDNTTAFLTSDRFWHKKVQIKAFYFGEYDVLYVSYPGLPPSPPLPPSSLNMFNGGPYSNDGNNGRTIKPFGVDIQKRRHKGGLSRGIIAIIAVSVSLAVVLCAAAAWVMFKFRDHVNQPASTPQQLSPPSLTKEPGTAGSLRGGGVGSLSTSFRSSMAAYTGSAKTFSTNDIEKATDNFNASRILGEGGFGLVYSGILEDGTKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICIEDSFRCLVYELVPNGSVKSHLHGVDRENSPLDWGARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEENKHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTSKEGCEAMIDPSLGADVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEEAGSRSSSQEEDWSVVLDLGISNVSGELPENFQSQFSSTNFDSGVDIERGLAASELFSSSARFGRVESGSFRRNSYSGPLRTGRSRRLWQIIRSLSSGSVSEHGTMLKL 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00702 1261 PANTHER OS01G0750732 PROTEIN 594 1162 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 422 583 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 806 822 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 79 366 - -
Pumo4g00702 1261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 989 1001 IPR008271 GO:0004672|GO:0006468
Pumo4g00702 1261 Pfam Protein tyrosine and serine/threonine kinase 869 1140 IPR001245 GO:0004672|GO:0006468
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 311 344 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 169 190 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 220 239 - -
Pumo4g00702 1261 FunFam receptor-like serine/threonine-protein kinase ALE2 840 942 - -
Pumo4g00702 1261 ProSiteProfiles Protein kinase domain profile. 867 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00702 1261 Gene3D Transferase(Phosphotransferase) domain 1 943 1166 - -
Pumo4g00702 1261 FunFam Receptor-like serine/threonine-protein kinase ALE2 943 1162 - -
Pumo4g00702 1261 Gene3D Phosphorylase Kinase; domain 1 838 942 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 806 835 - -
Pumo4g00702 1261 CDD STKc_IRAK 873 1141 - -
Pumo4g00702 1261 ProSitePatterns Protein kinases ATP-binding region signature. 873 895 IPR017441 GO:0005524
Pumo4g00702 1261 SUPERFAMILY Protein kinase-like (PK-like) 847 1140 IPR011009 -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 460 510 - -
Pumo4g00702 1261 MobiDBLite consensus disorder prediction 531 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00702 Pumo-Chr4 9149078 9158319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00702 346 1257 Receptor kinase-like Gene Family AT5G56890 55.901 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pumo4g00702 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00702 - - gmx:100816296 2115.89