Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00690 ATGAGATCTATGATGGATGAAATTGAAAAGCTTAACACGAGAAATCAGCAGCTGATGACAGTTTTATCAGCCAAAGAAGCTACAACTACTAGTACTATTGAAGAAAACAAAGCTAAAGCTAGCTCCTCCAACTCTAATGAAAGATTGAATGTTGGGGTTTCGCATGTATCAGAGTCAGAAGAGCAAATGGTGGACTTGCAAGTGACAGTGAGAGGAGAAAGTTCTCAAGTTGATGTATTGATTCGGTTATTGGAATTCTTAGAAAGGGTTCAGAACGTAAACTTGATTTCCATGGACGCAAACAACCAGATTACAGGAGGGACAGCCATTAACCAATTAACCTTCAGGCTGAGGATTATTGAGGGCGGTGAATGGGACGAGCGTGTCTTCCAGGAAGCAGTTAGAAGAGTGGTCGCTGACACAATACAATGGCAACAACTTTGA 444 0.4144 MRSMMDEIEKLNTRNQQLMTVLSAKEATTTSTIEENKAKASSSNSNERLNVGVSHVSESEEQMVDLQVTVRGESSQVDVLIRLLEFLERVQNVNLISMDANNQITGGTAINQLTFRLRIIEGGEWDERVFQEAVRRVVADTIQWQQL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00690 147 Coils Coil 1 28 - -
Pumo4g00690 147 MobiDBLite consensus disorder prediction 27 48 - -
Pumo4g00690 147 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 140 IPR044658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00690 Pumo-Chr4 8953640 8955764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00690 1 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.690 8.60e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00690 - - gmx:102670282 213.772