Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00680 ATGAAGCGGTCATGTAGTTCGAGCGGTCATTACTTTTGGTTAATCAATATGTTCCTGTTGCTTTTGGCAGTTAAGTCCGAACTGACAACAGACTTCTATAAGTCATCATGTCCTAACGTTTCCAAAATAGTAAGGAGAGAGGTTCAGAAAGCTCTCACGAATGAGATGCGAATGGCTGCCTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTGAATGGTTGTGATGGATCAATACTACTAGATGGTGGTGATGATGGAGAGAAGTCTGCTGCTCCTAACCTGAACTCTGCCAGAGGATATGATGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGAATGTGATGGGGTTGTCTCCTGCGCTGATATATTAGCCATCGCTGCCAGAGATTCTGTTTTCCTAAGTGGTGGTCCTTCTTGGAAGGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACACTAGCAAATGAGGCGCTTCCTTCGCCATTTGATCCATTGGATACCATCATTTCAAAGTTTACTAATATGGGCCTTAATCTCACAGATGTTGTTTCTTTATCAGGTGCCCATACTATTGGCCGAGCAAGGTGTACACTGTTTAGCAATAGATTGTTCAACTTCTCAGGAACAGGTGAACCAGACAGTACACTAGACACTGACATGCTCTCTGACCTGCAAAGTTTGTGTCCTCAAAATGGAGATGGAAATGTAACTACAGTCCTTGATCGGAACTCATCGGATCTATTTGACAACCACTACTTCAAGAACTTGCTCAGTGGAAAGGGGCTTCTTAGTTCTGACCAGATTCTATTTTCTAGTGATGGGGCTAATTCAACAACTAAACCTTTAGTCCAAAGCTATAGCAACGATAGTGATCTCTTTTTTGGGGACTTTGTCAGTTCTATGATCAAGATGGGGAATATAAATATAAAGACTGGGACTGATGGAGAAATTAGGAAGAACTGCAGAGTGATAAATTCGTAG 993 0.4209 MKRSCSSSGHYFWLINMFLLLLAVKSELTTDFYKSSCPNVSKIVRREVQKALTNEMRMAASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAAPNLNSARGYDVVDTIKSSVESECDGVVSCADILAIAARDSVFLSGGPSWKVLLGRRDGTVSNGTLANEALPSPFDPLDTIISKFTNMGLNLTDVVSLSGAHTIGRARCTLFSNRLFNFSGTGEPDSTLDTDMLSDLQSLCPQNGDGNVTTVLDRNSSDLFDNHYFKNLLSGKGLLSSDQILFSSDGANSTTKPLVQSYSNDSDLFFGDFVSSMIKMGNINIKTGTDGEIRKNCRVINS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00680 330 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 FunFam Peroxidase 163 308 - -
Pumo4g00680 330 FunFam Peroxidase 31 195 - -
Pumo4g00680 330 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Pumo4g00680 330 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 PANTHER PEROXIDASE 72-RELATED 18 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 Gene3D Peroxidase, domain 2 163 308 - -
Pumo4g00680 330 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 Gene3D - 32 329 - -
Pumo4g00680 330 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Pumo4g00680 330 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g00680 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00680 Pumo-Chr4 8840313 8842727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00680 9 329 Peroxidase AT5G19890 62.112 2.30e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00680 K00430 - gmx:100814964 596.66