Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00679 ATGAAGCGGCCATGTTCTTCAAGCGGTTATTACTTTTGTCTAATCAATATGTTCCTGTTGCTTTTGGCAGTAAGGTCCCAACTGATAACAAACTTCTATGAGTCATCATGTCCTAACGTTTCCAAAATAGTAAGGAGAGAGGTTCAAAAAGCTCTAATGAATGAGATGCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTGAATGGTTGTGATGGATCAATACTACTAGATGGTGGTGATGATGGAGAAAAATCTGCTATTCCTAACCTGAACTCTGCTAGAGGATTTGAAGTGGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGTAGTGGGGTTGTCTCCTGTGCTGATATATTAACCATCGCTGCCAGAGATTCTGTTTTCCTAAGTGGTGGTCCTTTTTGGAAGGTTCTGCTAGGACGAAGAGATGGAACCATCTCAAACGGAACACTGGCAAATGAGGCGCTTCCAGCGCCAATTGATCCATTGGATACCATCATTTCAAAGTTTAATAATATGGGCCTTAATCTCACAGACGTTGTTTCTTTATCAGGTGCCCATACTATTGGCCGAGCAAGGTGTACATTGTTTAGCAATAGATTGTTCAACTTCTCAGGAACAGGTGCACCAGACAGTACACTAGACACTGACATGCTCTCTGGCCTGCAAAGTCTGTGTCCTCAAAATGGAGATGGAAACGTTACTACAGTCCTTGATCGGAACTCATCGGATCTATTTGACAGTCACTACTTCAAGAACTTGCTCAGTGGAAAGGGCCTTCTCAGTTCTGATCAGATTCTGTTTTCTAGTGACGGGGCCAATTCAACAACTAAACCTTTAGTCCAAAGCTATAGCAACGATAGTGGACTCTTCTTTGGGGACTTTGTCAATTCTATGATCAAGATGGGGAATATAAATATAAAGACTGGGACTGATGGAGAGATTAGGAAGAACTGCAGAGTGATAAATTCGTAG 993 0.4199 MKRPCSSSGYYFCLINMFLLLLAVRSQLITNFYESSCPNVSKIVRREVQKALMNEMRMAASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAIPNLNSARGFEVVDTIKSSVESACSGVVSCADILTIAARDSVFLSGGPFWKVLLGRRDGTISNGTLANEALPAPIDPLDTIISKFNNMGLNLTDVVSLSGAHTIGRARCTLFSNRLFNFSGTGAPDSTLDTDMLSGLQSLCPQNGDGNVTTVLDRNSSDLFDSHYFKNLLSGKGLLSSDQILFSSDGANSTTKPLVQSYSNDSGLFFGDFVNSMIKMGNINIKTGTDGEIRKNCRVINS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00679 330 Gene3D Peroxidase, domain 2 163 308 - -
Pumo4g00679 330 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Pumo4g00679 330 PANTHER PEROXIDASE 72-RELATED 18 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 FunFam Peroxidase 163 308 - -
Pumo4g00679 330 Gene3D - 32 329 - -
Pumo4g00679 330 FunFam Peroxidase 31 200 - -
Pumo4g00679 330 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Pumo4g00679 330 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 Pfam Peroxidase 44 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00679 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00679 Pumo-Chr4 8834563 8837370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00679 14 329 Peroxidase AT5G19890 63.323 4.94e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00679 K00430 - gmx:100787073 596.66