Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00674 ATGGAGGAAATATCTTCTAGTGTTGCAGTACCTTTTACATTTGGCGTTGGAAATTTGATTCAAAAGGAGTCTGCAGTGACAACTCACATGGAAATAACTGGGCTGAAGCTTATGGCAAATACAGCAGCGGCTGCTTTGATGTTGAATCCTGCAGTGGAGTGTTTAAATGAGAATCAAGTTGGAGCTGCCCTTGTCTCAGAAGTGGTTACTGAATGTGAGAGTAATTGGGTCTTGAATGAAAGCCATAACCAGGCAAGAAAGGAAGATGAATTAATGTTAGCAGTGGATTTTCAGTGTCTACATAGTTCAAGCTCTCAATCCGTGGCTAATGGCAAAAGTGATCCTTGTAGGGAGGAAGCTGTGGCATTGAAGAGTAGTTTTTCTGAAATAGATTCACCAATCATGATCAAGGTTGATGATGATGTTAATGGTAAGTCCGGAATAAGCGAGCCTAGTCCATCAATGAAGCCAGTGGAGGACACAATTTCTGTTGCTATGGATATTACTAGTGAGGATCAAAGTGGATCAGATGAGTCTGATCCTAAACCATCTGCTGTGCTTCCTGATCAGTTGCCAGGGGAGAATAAAACATGGAGAACAAGCAACCCGAATGCTTTGGAAGTGAATAGTGGCCCTCTCTGGGGTTCCTCATCAATTTGTGGAATGAGACAGGAGATGGAAGATGCTATTTCTGTTAAGCCTCAACTTTTTCAAGTTTCTTCACAGATGCTAATAAATGACCATGTGAATGAGAATGAAAAACATTCACTAGCCCACTTTTTTGCTGTCTACGATGGACATGGTGGCCTTCAGGTTGCAAATTACTGCCAGGAACGCCTTCATTCAGTATTGATTGAGGAGATAGAGACTGCGCAATCAAGTTTGGCTGAAACAAATGGGAGAGATGATTGGCAGGACCATTGGAAGAATGCATTCATCAGTTGTTTTCAGAAAGTGGATGATGAGGTTGGAGGAATTGGTGCAACTAACAGTGGAAACAACAGTGACGGGTCTGAGTCTAATATTGAACTTGTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCATATAATAGTTGCAAATTGTGGAGATTCAAGAACTGTCTTATACCGCGGAAAAGAAGCCATGCCATTGTCTTCTGACCACAAACCAAATAGAGAGGACGAGTGGGCTAGGATAGAAGCTGCTGGAGGAAGAGTCATACATTGGAAAGGATATCGAGTTCTTGGTGTCTTGGCTATGTCAAGGTCCATAGGTGATAGATACCTGAAACCATGGATAATTCCAGAACCTGAAGTCAATATTGTGCGTCGAGAGAAAAACGATGAGTGTCTTATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCCTGTGAGGTTGCAAAGAAGCGAATCCTTCTTTGGCACAAGAAGTATGGTGACAACGGCAGCGCAACAGGACGCGGCGAAGGAGCTGATCCTGCAGCTCAGTCCGCTGCAGAGTATCTAACTAAGCTTGCCATCCACAGGGGAAGCCAAGATAACATCTCTGTAATTGTGATAGACTTAAAGGCTCAAAGAAAAATTAAGAGAAAGCCATAA 1614 0.4294 MEEISSSVAVPFTFGVGNLIQKESAVTTHMEITGLKLMANTAAAALMLNPAVECLNENQVGAALVSEVVTECESNWVLNESHNQARKEDELMLAVDFQCLHSSSSQSVANGKSDPCREEAVALKSSFSEIDSPIMIKVDDDVNGKSGISEPSPSMKPVEDTISVAMDITSEDQSGSDESDPKPSAVLPDQLPGENKTWRTSNPNALEVNSGPLWGSSSICGMRQEMEDAISVKPQLFQVSSQMLINDHVNENEKHSLAHFFAVYDGHGGLQVANYCQERLHSVLIEEIETAQSSLAETNGRDDWQDHWKNAFISCFQKVDDEVGGIGATNSGNNSDGSESNIELVAPETAGSTAVVAILSQTHIIVANCGDSRTVLYRGKEAMPLSSDHKPNREDEWARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDECLILASDGLWDVMTNEEACEVAKKRILLWHKKYGDNGSATGRGEGADPAAQSAAEYLTKLAIHRGSQDNISVIVIDLKAQRKIKRKP 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00674 537 CDD PP2Cc 215 527 IPR001932 -
Pumo4g00674 537 Gene3D - 201 537 IPR036457 -
Pumo4g00674 537 MobiDBLite consensus disorder prediction 170 202 - -
Pumo4g00674 537 SUPERFAMILY PP2C-like 211 528 IPR036457 -
Pumo4g00674 537 ProSiteProfiles PPM-type phosphatase domain profile. 213 527 IPR001932 -
Pumo4g00674 537 SMART PP2C_4 203 525 IPR001932 -
Pumo4g00674 537 FunFam Protein phosphatase 2C 16 201 537 - -
Pumo4g00674 537 ProSitePatterns PPM-type phosphatase domain signature. 260 268 IPR000222 GO:0043169
Pumo4g00674 537 PANTHER PROTEIN PHOSPHATASE 169 527 IPR015655 GO:0004722|GO:0006470
Pumo4g00674 537 Pfam Protein phosphatase 2C 237 520 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00674 Pumo-Chr4 8775140 8778846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00674 146 537 PP2C-type Phosphatase Gene Family AT4G26080 53.769 1.33e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00674 K14497 - gmx:100802159 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00674 4 8775140 8778846 Pumo4g00674 4 8775140 8778846 ECH
Pumo4g00674 4 8775140 8778846 Pumo2g01664 2 31297290 31301225 PCT