Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00668 ATGTCTGCACCAGTGAATATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGCACAAGCATGGATTGATGGAGAAGTTTCTAAAATCAATGGTGAAGAAGTCCATGTTCGCACCACAAATGGGAAAACAGTTGTCAAAAATATCTCAAAGGTTTTTCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTAGATGACATGACAAAATTGTCTTACTTGCATGAACCAGGAGTTCTGCACAATTTGGCAACTAGATATGAACTTAATGAAATCTATACATATACTGGAAATATCCTGATTGCAATAAATCCTTTTCAAAGGTTACCGCATCTATACGATACTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAATTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGAAAAAGCAACTCAATCCTGGTCAGCGGTGAGAGTGGGGCTGGAAAAACAGAGACAACAAAAATGCTTATGCGGTATCTTGCATATCTTGGGGGCCGATCTGGAGTAGAAGGGCGGACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACAGTTAGAAACAACAACTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAAGGAAGAATCTCTGGGGCAGCTATACGGACATATTTGCTTGAAAGGTCTCGTGTCTGTCAAATTTCAGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTCTGTGCAGCACCAGCTGAGGAAAAAGAGAAGTATAAGCTGGGAAGTCCTAGCTCCTTTCATTACTTAAATCAATCCAAATGCTATGCGCTGGATGGAGTGGATGATACTGAAGAATATCTTGCAACTCGAAGGGCAATGGATGTTGTTGGAATCAGTGAGGAGGAGCAGGAAGCTATTTTTAGGGTTATTGCAGCAATTTTGCACCTTGGAAATATTGAGTTTGCAAAAGGAGAGGAGATTGACTCTTCTGTCATCAAGGATGAGAAGTCTAGGTTCCATCTTAATGTAACTGCTGAACTTCTAAAGTGTGACTGTAAGAGCTTGGAAGATGCACTGATCAAGCGTGTGATGGTAACGCCGGAGGAGGTTATTACAAGAACCCTTGATCCTGTTGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCCCGTTTGTTTGATTGGCTAGTGGAGAAGATTAACAATTCGATTGGGCAAGATCCAAATTCGAAATCTATTATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGCTGCAACAACATTTTAATCAGCATGTATTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATCAATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCAAAGTCTACACATGAAACTTTTGCTCAGAAATTGTATCAGACATTCAAAAACAACAAGCGCTTCATCAAACCTAAACTTTCTCGGACTAGTTTTACCATATCCCATTATGCAGGGGAGGTGACATATCTAGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTGGCAGAACATCAGGATCTGCTCACAGCCTCAAAATGCTCATTTGCGGCTGGTCTATTCCCCCCTTCACCAGAGGAGTCTTCAAAATCATCAAAGTTCTCTTCAATAGGATCTCGCTTCAAGCTACAACTTCAATCTTTGATGGAAACCCTGAATTCAACAGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTCAAGCCTGCTATTTTTGAAAATGTCAATATTATCCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCGACCAGACGTACCTTTTATGAATTTCTTAACCGATTTGGTGTTCTTGCCCCTGAAGTTCTGGACGGAAACTATGATGACAAGGTTGCATGCCAAATGATCCTGGATAAAATGGGTATGAAAGGCTATCAGATAGGCAAGACAAAGGTTTTCCTAAGAGCTGGCCAGATGGCTGAATTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCTGCTAGAATCATCCAGAGGCAAATACGTACCCATATTGCACGCAAGGAATTCATTGAATTGCGCCAAGCTGCAATTTGCTTGCAATCTAATTTGCGAGGAATATTGTCCCGGAAGCTTTATGAGCAGTTGCGACGTGAAGCAGCAGCTGTAAAAATACAAAAGAACTTCAAAGGATACATTTCCAGGAAATCATACTTAACAGCACGATCATCTGCAATTAGACTGCAAACAGGTTTAAGGGCTATGAAAGCTCGTGATGAATTTAGATTTAGAAAGCAAACGAAGGCTGCAATTTACATCCAGGCTTATTCGCGTCGACTAATTGCATATTCATACTATAAAAGATTGCAAAAGGCTGCAGTTGTTACTCAATGTGGTTGGAGGAGAAGGGTTGCTAGAAGGGAACTTAGAATGCTTAAAATGGCTGCAAGAGAAACAGGGGCCCTCAAAGAAGCTAAGGACAAACTAGAAAAGCGTGTCGAAGAACTTACTTGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAGGCACAAGAAATTGCTAAGTTACAGGAAGCTTTACATGCAATGCAAATACAAGTAGAAGAAGCAAATGCCAGGGTCATCAAAGAGCGTGAGGCGGCACGAAAGGCCATTGAAGAAGCACCTCCAGTTGTTAAGGAGACTCCTGTTATAATTCAAGATACTGAAAAGATTAATTCATTATTGGCTGAAGTCAATAGTTTGAAGGAATCACTGCTATTGGAAAAAGAGGCTAAAGAAGAGGCCAGAAAAGCTCAGGCTGAGGCTGAAGCTAGAAATAAAGAGATGGTTAAAAAGGTTGAAGATTCTGACCGCAAAGTGGATCAACTTCAAGAATTGGTTCAGAGATTGGAGGAAAAGATTTCCAATGCAGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCACTGGCTGTATCACCAACTGGAAAAGCTCTGTCTGCAAGACCAAGGACAGTGATTATTCAGAGGACACCCGAAAATGGGAATGCTCTAAATGGTGAAGCAAAAATGGGATTGGATATGACTCTTGCTGTATCCAATGTGCGTGAGCCTGAATCTGAGGGAAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAACCAGGACTTATTGATCAAGTGCATATCACAAGATTTGGGATTTTCTGGGGGCAAACCTGTTGCTGCATGTGTCATATATAAATGCCTTCTCCACTGGAGGTCATTTGAAGTTGAAAGGACAACTGTATTTGACCGTATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTTAAAGCTAGTGGAGCTGCTAGCTTAACACCACAACGGCGGAGAACAGCATCATCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCGTCTCCCCAAAGTGCTGGATTGTCATTTCTAAATGGTCGAGGTCTTAATAGACTGGATGATTTACGACAAGTAGAAGCAAAATATCCAGCACTGCTGTTTAAGCAGCAGCTTACTGCCTTCCTTGAAAAAATATATGGAATGATAAGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGCTCCAAGAACCTCGCGTCAAAGTTTAGTAAAAGGACGCTCACAGGCAAATGTAGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAAGCTTAAATAATTATCTAAAGATAATGAAAGCAAACTATGCGCCTCCTTTCTTGGTCCGAAAAGTGTTCACTCAAATATTCTCATTCATCAATGTTCAATTATTCAATAGTCTTCTGTTGCGTCGGGAGTGTTGTTCATTCAGCAACGGGGAGTATGTAAAAACAGGTCTGGCTGAATTAGAGCAGTGGTGCATCGAGGCAACGGAAGAGTATACTGGCTCTGCTTGGGAGGAACTGAAACATATCAGGCAGGCTGTTGGATTCCTGGTGATACATCAAAAACCCAAAAAGTCCCTGAATGAAATTACAAAGGAGCTTTGCCCTGTGGGTGCCTTCTTCCTTTCTGTCAACTATTTATGA 4341 0.407 MSAPVNIIVGSHVWIEDPAQAWIDGEVSKINGEEVHVRTTNGKTVVKNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKEKYKLGSPSSFHYLNQSKCYALDGVDDTEEYLATRRAMDVVGISEEEQEAIFRVIAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNVTAELLKCDCKSLEDALIKRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFAAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILDKMGMKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHIARKEFIELRQAAICLQSNLRGILSRKLYEQLRREAAAVKIQKNFKGYISRKSYLTARSSAIRLQTGLRAMKARDEFRFRKQTKAAIYIQAYSRRLIAYSYYKRLQKAAVVTQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEIAKLQEALHAMQIQVEEANARVIKEREAARKAIEEAPPVVKETPVIIQDTEKINSLLAEVNSLKESLLLEKEAKEEARKAQAEAEARNKEMVKKVEDSDRKVDQLQELVQRLEEKISNAESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGNALNGEAKMGLDMTLAVSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTTVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFLNGRGLNRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRSQANVVAQQALIAHWQSIVKSLNNYLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCIEATEEYTGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPVGAFFLSVNYL 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00668 1446 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Pumo4g00668 1446 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Pumo4g00668 1446 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 SMART iq_5 830 852 IPR000048 GO:0005515
Pumo4g00668 1446 SMART iq_5 734 756 IPR000048 GO:0005515
Pumo4g00668 1446 SMART iq_5 757 779 IPR000048 GO:0005515
Pumo4g00668 1446 SMART iq_5 853 875 IPR000048 GO:0005515
Pumo4g00668 1446 SMART iq_5 782 804 IPR000048 GO:0005515
Pumo4g00668 1446 SMART iq_5 805 827 IPR000048 GO:0005515
Pumo4g00668 1446 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Pumo4g00668 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 785 IPR027417 -
Pumo4g00668 1446 CDD MyosinXI_CBD 1113 1446 IPR037975 GO:0007015
Pumo4g00668 1446 CDD MYSc_Myo11 76 720 IPR036018 -
Pumo4g00668 1446 PANTHER MYOSIN 58 1434 - -
Pumo4g00668 1446 Pfam IQ calmodulin-binding motif 785 803 IPR000048 GO:0005515
Pumo4g00668 1446 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Pumo4g00668 1446 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Pumo4g00668 1446 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Pumo4g00668 1446 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Pumo4g00668 1446 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Pumo4g00668 1446 FunFam Class V myosin 439 580 - -
Pumo4g00668 1446 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 ProSiteProfiles Dilute domain profile. 1162 1446 IPR002710 -
Pumo4g00668 1446 Gene3D - 833 882 - -
Pumo4g00668 1446 Gene3D - 785 832 - -
Pumo4g00668 1446 Gene3D - 735 784 - -
Pumo4g00668 1446 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 Pfam DIL domain 1349 1435 IPR002710 -
Pumo4g00668 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Pumo4g00668 1446 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Pumo4g00668 1446 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 ProSiteProfiles IQ motif profile. 783 809 IPR000048 GO:0005515
Pumo4g00668 1446 FunFam Myosin heavy chain 252 307 - -
Pumo4g00668 1446 FunFam unconventional myosin-Va 786 833 - -
Pumo4g00668 1446 Coils Coil 979 1051 - -
Pumo4g00668 1446 Gene3D - 252 310 - -
Pumo4g00668 1446 Gene3D - 439 623 - -
Pumo4g00668 1446 FunFam unconventional myosin-Va 834 881 - -
Pumo4g00668 1446 FunFam Myosin XI D 667 730 - -
Pumo4g00668 1446 FunFam Myosin 2 312 427 - -
Pumo4g00668 1446 Coils Coil 877 957 - -
Pumo4g00668 1446 Gene3D Kinesin motor domain 65 662 IPR036961 -
Pumo4g00668 1446 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Pumo4g00668 1446 FunFam unconventional myosin-Va 737 785 - -
Pumo4g00668 1446 Pfam Myosin N-terminal SH3-like domain 9 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo4g00668 1446 SMART DIL_2 1348 1446 IPR002710 -
Pumo4g00668 1446 Gene3D - 667 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00668 Pumo-Chr4 8709870 8725994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00668 67 1436 Myosins gene family AT5G20490 83.577 0.0 2370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00668 K10357 - gmx:100777802 2693.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00668 4 8709870 8725994 Pumo4g00668 4 8709870 8725994 ECH