Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00661 ATGCTTACGTGCATAGCTCGTCCTAAGAAACCGGATGAGTCGGATCCAAACAACGCGACAAGCGCCGCTAAATCGCAAGCCATCAAATCCCTCACTTCTCAGATAAGGGATATGGCGTTGAAGGCTTCGGGAGCGTACAAGCATTGCGCTCCGTGCACGGGGCCAGCGGCGCAGGGGCGAGTTCGGAGCAACGGCACCGAGTCGGACGCGGATTCGGACCGGTTCCGGTGGTCGTACCGGAGAACGGGGAGTTCGAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATTTCGAGCGGGGAGGGGACGCCGAACTCGGCGAGCGGGCGGAGGGCAGAGCCGGTGGTGCTGTTCGTTGAAGAGAACGAGCCGAAAGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATCACGTTCGTGTCGTTGCCACGTGGCGGGAACGATCTCAAGCGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAACTACGACAAGGTTATGGAACTTTACAATGTTCAAAGGTTTAACCGCCAAGCATTCCCTCTTCCAACGCCACCAAGATCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGAAAGCCCTGTGACACCTCCACTGAACAAGGAACGGTTACCTCGTAATATGTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCTCGGCATTTGTATGACTCAAATGGTATGAACTCAACACCAAAAGTGTCCACCATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCGAGAGAGGCTGATCGCTCGGGTGATTTTTCAATCAGCAATGCTAGTGATTTGGAGACTGAATGGGTTGAACAGGATGAACCTGGGGTTTACATTACGATCAGAGCATTGCCAGGTGGCGCAAGAGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAGATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATATTTGTGA 1101 0.5277 MLTCIARPKKPDESDPNNATSAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPAAQGRVRSNGTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPTPPRSEDESSKLESAEESPVTPPLNKERLPRNMYRPTGMGMGYSSSDSFDHQSMQSRHLYDSNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSRERFGEMHARLWWEENRARIHEQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00661 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Pumo4g00661 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Pumo4g00661 366 MobiDBLite consensus disorder prediction 238 252 - -
Pumo4g00661 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Pumo4g00661 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Pumo4g00661 366 MobiDBLite consensus disorder prediction 195 252 - -
Pumo4g00661 366 MobiDBLite consensus disorder prediction 1 28 - -
Pumo4g00661 366 MobiDBLite consensus disorder prediction 49 71 - -
Pumo4g00661 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Pumo4g00661 366 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00661 Pumo-Chr4 8657833 8663544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00661 1 366 Major Intrinsic Protein MIP AT1G31880 44.675 1.66e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00661 - - gmx:100794109 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00661 4 8657833 8663544 Pumo4g00661 4 8657833 8663544 ECH
Pumo4g00661 4 8657833 8663544 Pumo2g01674 2 31445654 31452114 PCT