Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00606 ATGCAAACACAACGAGTTAACACTCTCGCCTTCACGCTCTTCCTCTTGTTGTTGCTGTCTCCACCACGAGCAGCCGCAGCAAGGCCACCGCGAGATCCGCTCCGTTTATCGTGCGCGAAGGCCAGGTACCCCACTCTCTGCGTCCAAACCCTCTCCAACTTCTCGAACCTCGCCACCAAGCCCCTGGACCTGGCCCAAGCCGCACTCAAGGTTAGCCTGGCCCGCACGCGCACCCTCTCCGTTTATTTCAAGACGCTGAATGCCACGTCATCGCGTTTCGGGCAGAGGCAGCGAGTTGCGGTGAGTGACTGCGTGGAGCAGATATCCGACTCGGTGACTCAGTTGAGCAACACGCTGAACGAGTTGCAGCACCTCCGCACCGGAACCTTTCAGTGGCAGATGAGCAACGCCCAGACCTGGACCAGCGCCGCCCTCACCAACGGCGACACCTGCCTCACCGGCTTCAACGGCGGCGGCGGCGCCTCCGACGACGGGAAAATCAAGCTGGACGTGAAGCGAAGGATCACCGACGTAGCCATGCTCACGAGTAACGCGCTCTACCTCATCAATCGCCTCGGTGATAGCGTGAGTGGGAAGCCTCGCACTGATTTCGGAAACTGA 621 0.6023 MQTQRVNTLAFTLFLLLLLSPPRAAAARPPRDPLRLSCAKARYPTLCVQTLSNFSNLATKPLDLAQAALKVSLARTRTLSVYFKTLNATSSRFGQRQRVAVSDCVEQISDSVTQLSNTLNELQHLRTGTFQWQMSNAQTWTSAALTNGDTCLTGFNGGGGASDDGKIKLDVKRRITDVAMLTSNALYLINRLGDSVSGKPRTDFGN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00606 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
Pumo4g00606 206 Coils Coil 105 125 - -
Pumo4g00606 206 NCBIfam pectinesterase inhibitor domain 7 192 IPR006501 GO:0004857
Pumo4g00606 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 193 IPR035513 -
Pumo4g00606 206 Pfam Plant invertase/pectin methylesterase inhibitor 35 187 IPR006501 GO:0004857
Pumo4g00606 206 CDD PMEI-like_3 36 192 - -
Pumo4g00606 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 188 - -
Pumo4g00606 206 SMART PMEI_2 29 188 IPR006501 GO:0004857
Pumo4g00606 206 FunFam Pectinesterase inhibitor 3 30 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00606 Pumo-Chr4 7978772 7979392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00606 27 200 Carbohydrate Esterase AT3G49220 31.319 2.22e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00606 - - gmx:100810705 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00606 4 7978772 7979392 Pumo4g00606 4 7978772 7979392 ECH