Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00600 ATGGATGATGCTGGAAGTTCCAAATTGACTGGAATTAGGCAGATTGTGAGATTGAAGGAAATGTTTCAGAAGTGGCAAACTGTGACTCTGGGCTCAAAAGATTCCAACAATCATTCTGATGTGACTCATCATCATGGGGGCATATCACCAATGATTAACAAAAGGCTTACAAATATTGTGTATTGTGACTCTGATGAGGATGGCTGCTACAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCTGTCTATGTTGGGCCTGAGCTTCGGAGGTTTATCATCCCCACAAGCTACCTTAGCCACTCTTTGTTCAAGGTTTTGCTGGAAAAGGCTGCAGAAGAATTTGGGTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAGACCTTTAAATACCTCTTGAATTGCATGGAGAACCATGATGATAGCTCAACTGGAAACACAGGAACTGTGGAAGAATAA 474 0.4283 MDDAGSSKLTGIRQIVRLKEMFQKWQTVTLGSKDSNNHSDVTHHHGGISPMINKRLTNIVYCDSDEDGCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHDDSSTGNTGTVEE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00600 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 57 137 IPR003676 GO:0009733
Pumo4g00600 157 Pfam Auxin responsive protein 64 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00600 Pumo-Chr4 7918941 7921283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00600 1 157 Calmodulin-binding Proteins AT3G43120 66.875 9.94e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00600 K14488 - gmx:100795275 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00600 4 7918941 7921283 Pumo4g00600 4 7918941 7921283 ECH
Pumo4g00600 4 7918941 7921283 Pumo2g01810 2 33844054 33845753 PCT