Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00599 ATGAAGGGTCACGTTGAAAGTGGAGCTACATTTTTTGCTGCACTTACACTCGCACTCGCTCTCCACCTTGTCCAAGCAACCACCACCGTTTTCCCTCATAATGATAACTCTTCTTCCGTTAGAATCGTGAGGGTTCGGAGGGACGGCGCGGGAGATTTCAGGACGGTGACGGACGCCGTTAACAGCATTCCGTCGGGGAACAAGCGGCGAGTGGTGGTGTGGATCGGCATGGGCGAGTACCGCGAGAAGGTCACCGTGGACAAATCGAAACCTTTCGTTACGTTTTATGGAGAGAGGAATGGGAACGACAGCGACATCATGCCCATCATAACCTACAACGCCACGGCGTTGCGGTATGGGACAGTCCACAGCGCCACCGTCGCTGTCCACTCCGACTACTTCGTCGCTGTCAATGTCGCATTTGTGAACTCGTCTCCAATGCCGGAAGAAAATAGTGTTGGAGCACAAGCATTAGCCATGAGGATATCAGGGGACAAGGCTGCATTCTACAACTGCAGGTTCGTTGGCTTTCAGGACACTTTATGCGATGATAAAGGCAGGCATTTTTTCAAGGACTGCTACATCCGAGGCACCTACGATTTCATCTTTGGAAATGGAAAATCAATCTACTTGAGAACTACCATAGAATCGGTTGCGAAGGGTTTGAGTGTTATCACAGCACAAGGTAGGGAAAGCATGACACAAGACACTGGATTCACTTTCTTGCACTGCAACATAACGGGAAGTGGTAACGGAAACACTTACCTTGGGCGTGCCTGGAAGAAGAGCCCTAGGGTGGTTTTTGCTTACACGTACATGGGCTCCCTCGTCAATACCCGGGGATGGTTCAGCAACCAACCTGCTCAAGCCAAATCCAACCAGACAATCTACTATGGAGAATATAGGTGCATGGGACCAGGAGCTGTTTCCTCTGGCCGCGTAAAATTTCGCAAGATACTGTCTGACGAAGAAGCAAAGCCCTTCATGAGCATGGCTTATATTCATGGAGGAAAGTGGGTTGTCCCACCTCCCAAGCTGTGA 1041 0.5034 MKGHVESGATFFAALTLALALHLVQATTTVFPHNDNSSSVRIVRVRRDGAGDFRTVTDAVNSIPSGNKRRVVVWIGMGEYREKVTVDKSKPFVTFYGERNGNDSDIMPIITYNATALRYGTVHSATVAVHSDYFVAVNVAFVNSSPMPEENSVGAQALAMRISGDKAAFYNCRFVGFQDTLCDDKGRHFFKDCYIRGTYDFIFGNGKSIYLRTTIESVAKGLSVITAQGRESMTQDTGFTFLHCNITGSGNGNTYLGRAWKKSPRVVFAYTYMGSLVNTRGWFSNQPAQAKSNQTIYYGEYRCMGPGAVSSGRVKFRKILSDEEAKPFMSMAYIHGGKWVVPPPKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00599 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 340 - -
Pumo4g00599 346 SUPERFAMILY Pectin lyase-like 42 340 IPR011050 -
Pumo4g00599 346 Gene3D - 37 343 IPR012334 -
Pumo4g00599 346 Pfam Pectinesterase 44 336 IPR000070 GO:0030599|GO:0042545
Pumo4g00599 346 FunFam Pectinesterase 38 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00599 Pumo-Chr4 7911292 7913979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00599 37 346 Carbohydrate Esterase AT5G07410 51.447 3.49e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00599 K01051 - gmx:100790786 591.652