Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00598 ATGGCAAAAGGTGGAAAACTAATGAAGCTAAAGTCAGTGCTGAAGAAATGGAACTCATTCGGCAACGGCAAGCACAGCCGCCACCACAGCATCAGCGCCGTGGCCGACGACGAATCCTCTTCCAGATCGGACCTCCACGCCGTCTACGTCGGCAAGTCCCGCCGCCTCTACCGCCTCTCCCCCGACGTCCTCGACCACCCCGTCTTCCGGGAACTCGTCGAGCGGTCCCGCGACTCCGACCACCACCACGACCAACACCAACAAAACGAAGACACTATCAATGTCGCATGCGAGGTTGTCCTTTTCGAACACTTGCTCTGGATGCTCGAAAACGCCGATCCACAACCCGAGTCACTCAACGAACTCGTCGACTTCTACGCTTGCTAA 387 0.5711 MAKGGKLMKLKSVLKKWNSFGNGKHSRHHSISAVADDESSSRSDLHAVYVGKSRRLYRLSPDVLDHPVFRELVERSRDSDHHHDQHQQNEDTINVACEVVLFEHLLWMLENADPQPESLNELVDFYAC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00598 128 PANTHER EXPRESSED PROTEIN 25 127 - -
Pumo4g00598 128 Pfam Auxin responsive protein 11 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00598 Pumo-Chr4 7893575 7894647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00598 6 111 Calmodulin-binding Proteins AT3G43120 25.735 1.33e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00598 - - ccaj:109809545 212.231