Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00588 ATGGATTCGTTAGAGAATGAACCTTGTCAATCTCCTTCTGCCTCTGACCAAACCCCTCCTCCTCCTTCCAATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAGAGTTCTAAAGATTGACCGTCTCGATCCTTCTGAGCTAAATTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCCACAGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGTGAGATGATTCCATTGCCAAATTCTTCAGTTCGGTCCAACATCAATTTTAAAAATGAAAACAGGTACAAGAGGCTCCTACGCATGGTCGACCTTACAAAGGACTTCTTTTTCAGCTACTCATACCACATTATGTGTAGTCTTCAAAGGAACATGTGTGATAATGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTGTATGGCTTTTTTAAACAGGAAACGCTTATGATATCCAGACGGGAGTTCACACTTACGCTCATTGCAAGACGATCACGTCATTATGCTGGTACTAGGTATTTGAGGCGTGGTGTTAATGAGAAAGGCAGAGTAGCAAATGATGTTGAGACAGAGCAAATAGTCTTTGAGGATGTTGCAGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAAAAAGATCAGAATTATCAAGCCACTAGACTTCACTTTGAAAACCTTGTTAAAAGATATGGGAATCCCATAATTATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGCGAGTCCATACTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTATCTGAGGAGAACAGGCTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTGCAAATGTCTTGCAGCTTCTTGGCAAAGTGGCTGCATATGCATTGACATTAACAGGTTTTTTCTATTGCCAAACAACACCAACCTTGAGACCAGAAGAATGTCTGAAATGGCCAAGTACAGACAATGTTGATAAGGGAATCTTTTCACCTACTAGACATGTCAATGATGACAATGAGGATGCTAATAATTTAGAGAGGAAACCAAGTGAAGGAAACAATGATGCCAATGAAAATTATTCTGTCAAACCACCCATGCTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGTACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTCCACGCTCTGGGAGTTATTGACCACCCAAAAATTGATCTTTATGACCCTGTAGCTGATGATTTGATGGGGTTTTATGAGCGGATGGGTGATACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATTTTCTCTGAGAGGAGGGGCCAGTGGAGAGCTGCAACGCAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTATAGCAATGCATACATGGATGCTATGAAACAGGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGGAAGCCTGCTCTGTGGGAGTTGGGCTCAGATCAGCTCTATGATACAGGAAGATATGGAGATGACGATGCAAGGTCATTTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTAATGAAAGTTCTACACCGATGTCAGCCCCAAAGGCCAAGCACGAAAAATTCCCAAGCCAAGGCGGCTTACCAGATCGATCAGAAGAAGGAAGCAAGGGTCTTTGTGAGTCATCACCAGAAATATCTACTACTGAGAGTGACATCTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGACAGCTCTTTGGAGATATGCAAAGAGAGCGCTGCCTTGAAAGTGAACATATTTACTATTCTGATCACGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACCTGGATTGGCTATCTTCTTCAGGAAATTCATGCGAAGAAGAGCCATTCGAGAGGTCATCAATTACCAACTCTCCAATTGCTGGAGTTTCTTCAGAAAATGTTGTCAATGGAATAGTGGTAGGAGAAGCAACTGCCTCCACTAGTGATTTGGGGGCCTCCAGCCTAAAGGGAAGGGAACAAACTGAATCCGAGTTATCCTACGGTAATGCGCGGTCCAACACGCCAGAGGAATTTCCAGATACTTTTGTAAACTGGGTGACTTATGGACAGACACTTTGCCATTGA 2520 0.4214 MDSLENEPCQSPSASDQTPPPPSNVCMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLPNSSVRSNINFKNENRYKRLLRMVDLTKDFFFSYSYHIMCSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQETLMISRREFTLTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVAEGLPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRQEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKAANVLQLLGKVAAYALTLTGFFYCQTTPTLRPEECLKWPSTDNVDKGIFSPTRHVNDDNEDANNLERKPSEGNNDANENYSVKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPKIDLYDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELGSDQLYDTGRYGDDDARSFFKRSFSDGNILNESSTPMSAPKAKHEKFPSQGGLPDRSEEGSKGLCESSPEISTTESDISFSRYTPSMPRRQLFGDMQRERCLESEHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGVSSENVVNGIVVGEATASTSDLGASSLKGREQTESELSYGNARSNTPEEFPDTFVNWVTYGQTLCH 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00588 839 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 11 830 IPR043573 GO:0043813|GO:0046856
Pumo4g00588 839 MobiDBLite consensus disorder prediction 652 704 - -
Pumo4g00588 839 MobiDBLite consensus disorder prediction 452 474 - -
Pumo4g00588 839 ProSiteProfiles Sac phosphatase domain profile. 165 558 IPR002013 GO:0016791
Pumo4g00588 839 MobiDBLite consensus disorder prediction 1 23 - -
Pumo4g00588 839 MobiDBLite consensus disorder prediction 448 484 - -
Pumo4g00588 839 Pfam SacI homology domain 102 398 IPR002013 GO:0016791
Pumo4g00588 839 MobiDBLite consensus disorder prediction 688 704 - -
Pumo4g00588 839 MobiDBLite consensus disorder prediction 794 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00588 Pumo-Chr4 7722936 7732756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00588 26 839 Acyl Lipid Metabolism Gene Families AT5G20840 63.337 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00588 K22913 - gmx:100810079 1635.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00588 4 7722936 7732756 Pumo10g00199 10 2753931 2776257 ECH
Pumo4g00588 4 7722936 7732756 Pumo4g00588 4 7722936 7732756 ECH
Pumo4g00588 4 7722936 7732756 Pumo2g01814 2 33940457 33954168 PCT