Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00583 ATGGCATCAAGGAAAGCTTTTAACCAATGCTTGGTTCTGCCAATCTTGCTGATGAATTGCTTTGTTTTGCTGGGTCAATGTGATAGGCCACTGAACACAGAAGAAGGAGAGGATTTGGTCACAGCAACCTGCAAGCACACCCTCCATTTCCAACTATGCATTTCCTCCTTGAGATCAGTCCCTGGTAGCAAGACATCAGATCTAAAAGTGCTTGCTGAGATTGCACTGAATCTGAGCACAACATATGCTGCAGACACTTTGAACTATGTTTATCAGCTGCAGTCTAATTCTTCTGCTGCCAATGGCTCCAACAACAACAACATTTACGTGTCGCGTTGCTTAAGTGACTGTGCAGAGGAATACTCGGAAGCCATAGAGAACTTGAAGGACTCAAAACAAGCACTTGCTAATGGAGATTGTGACCAAGTAGATACTTTGGTTTCTGCTGCTATGTCTGATGCTGAGACATGTGAGGATGGCTTCAAGGACATGCAAAGTGGGGACAGTGATTCCACCTCTCCTCTTACTGAGCGTAATCATTACTTCTCTGAACTGTGTAGTAATGCTCTTGCCATTACAAAACTACTAGTTTAA 594 0.436 MASRKAFNQCLVLPILLMNCFVLLGQCDRPLNTEEGEDLVTATCKHTLHFQLCISSLRSVPGSKTSDLKVLAEIALNLSTTYAADTLNYVYQLQSNSSAANGSNNNNIYVSRCLSDCAEEYSEAIENLKDSKQALANGDCDQVDTLVSAAMSDAETCEDGFKDMQSGDSDSTSPLTERNHYFSELCSNALAITKLLV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00583 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 197 IPR035513 -
Pumo4g00583 197 SMART PMEI_2 35 192 IPR006501 GO:0004857
Pumo4g00583 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 28 196 - -
Pumo4g00583 197 Pfam Plant invertase/pectin methylesterase inhibitor 38 192 IPR006501 GO:0004857
Pumo4g00583 197 NCBIfam pectinesterase inhibitor domain 14 196 IPR006501 GO:0004857
Pumo4g00583 197 Coils Coil 118 138 - -
Pumo4g00583 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 196 IPR035513 -
Pumo4g00583 197 FunFam Invertase/pectin methylesterase inhibitor family protein 35 197 - -
Pumo4g00583 197 CDD PMEI-like_1 39 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00583 Pumo-Chr4 7665080 7665850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00583 30 192 Carbohydrate Esterase AT5G53370 26.590 6.93e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00583 - - gmx:100785210 343.584