Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00582 ATGGCGTTTCAAGACTTTGACCTCATCTCAGAGCGGCGAAGAAATGAGAAGAGGCAAAAGATGAGGAAGAGAATCATGATTGGCGTGGTCTCTTCCGTTGTCCTCGTTGCCATGATAGGTGCAGTGCTCTTCGTTGTGGTTAGAAACGACGACACTGGCAATAGCAAAGGTAATACTAAGAACAACAACAAGTCACATAATAGCCATGCACAACAATCTTCTTCCACGACCAAGGATGATCACGTGGCACATTCGGAGAAGGTTGTGAAATTGGTGTGTAGCTCCGCAGATTACAAAGACAAATGTGAAGAGCCTCTCAACAAGGCCATGCAGGATGACCCCAAACTCACGCAACCCAAAGATCTTCTCAAGGCATATGTCAAACTTGCTGAGGATGAGCTTAGCAAGGCCTTCAACAAAACCACCTCCTTGAACTTTGAAACCGAGCAAGAGAAAGGGGCCTTTGAGGATTGCAAGAAGCTCTTCGAGGATGCCAAGGATGACATTGCAACCTCCATCTCCGAACTCGCCAAGGTTGAGATCAAGAATATCTCTCAGAGGACTCCTGATTTCAACAGCTGGCTTAGCGCTGTCATCACCTTCCAACAAGACTGCATTGATGGCTTTCCCGAGGGAAACAAAAAGACTGAACTTCAGTCTCTCTTCAACGATTCCAAGGAATTCGTTAGCAACTCCCTTGCCATTCTGTCTCAGGTTGCATCGGCTCTTTCTACACTCCAAACAATGGCACATGGCCGTTCCTTGCTATCTCTAGACAAAACCGATGGCCTTCCTTCTTGGATGAACCATGAGGACAGAAGGGTATTGAAGGCTATGGATAACAAACCTACACCTAATGTCACTGTGGCAAAAGATGGCAGTGGAGACTTCAAAACCATCTCCGAATGTTTAAATGCTGTCCCTCAAAATTTTGAAGGACGGTATGTGATTTATGTTAAAGAAGGAGTATACGATGAGACAGTGACAGTAACAAAGAAAATGCAAAATATAACTATGTATGGTGATGGATCCCAAAAGAGCATCATCACTGGCAGCAAAAACTATAGGGACGGTGTCAGGACTTTCCTTACTGCAAGTTTTGTGGTGGAGGGAGATGGATTCATAGGCCTGGCAATGGGATTCAGAAACACTGCAGGCCCTGATGGGCACCAAGCAGTGGCTGCAAGAGTGCAGGCAGATCGTGCAGTGTTTGCCAACTGCCGGTTTGAGGGCTACCAAGATACTTTATACACCCAAGCCCACAGACAATTCTACAGGAGCTGCATCGTTACAGGCACAATCGACTTCATCTTTGGCGACGCAGCTGTGGTGTTCCAGAACTGCATCATGATCGTTAGGAAGCCACTGGACAACCAGCAGAACATGGTGACCGCTCAAGGGCGAACGGACAAGCAACAGGCCACCGGAATTGTGCTGCAGAAGTGCACAATCAAACCTGATGACTCGCTGGTTCCAGTGAAGGACAAGATCAGGAGCTACCTTGGGAGGCCATGGAAGGAGTTCTCAAGAACCATTGTTATGGAATCAGAAATAGGTGACTTCATTCACCCTGATGGGTGGACAGCTTGGGCTGGAGACTTTGCTCTCAAGACATTGTACTATGCTGAGTATGGCAACACAGGACCTGGTGCTAGCACCAGTGCTAGGATCAAGTGGCCTGGTTACCAAGTCATTAACAAGGATCAGGCTACCCAGTTCACTGTGGGCTCTTTCTTGAAAGGCACATGGCTCCAGAGCACTGGCGTGCCCGCTGTGCAAGGCATGTACAATTAA 1794 0.476 MAFQDFDLISERRRNEKRQKMRKRIMIGVVSSVVLVAMIGAVLFVVVRNDDTGNSKGNTKNNNKSHNSHAQQSSSTTKDDHVAHSEKVVKLVCSSADYKDKCEEPLNKAMQDDPKLTQPKDLLKAYVKLAEDELSKAFNKTTSLNFETEQEKGAFEDCKKLFEDAKDDIATSISELAKVEIKNISQRTPDFNSWLSAVITFQQDCIDGFPEGNKKTELQSLFNDSKEFVSNSLAILSQVASALSTLQTMAHGRSLLSLDKTDGLPSWMNHEDRRVLKAMDNKPTPNVTVAKDGSGDFKTISECLNAVPQNFEGRYVIYVKEGVYDETVTVTKKMQNITMYGDGSQKSIITGSKNYRDGVRTFLTASFVVEGDGFIGLAMGFRNTAGPDGHQAVAARVQADRAVFANCRFEGYQDTLYTQAHRQFYRSCIVTGTIDFIFGDAAVVFQNCIMIVRKPLDNQQNMVTAQGRTDKQQATGIVLQKCTIKPDDSLVPVKDKIRSYLGRPWKEFSRTIVMESEIGDFIHPDGWTAWAGDFALKTLYYAEYGNTGPGASTSARIKWPGYQVINKDQATQFTVGSFLKGTWLQSTGVPAVQGMYN 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00582 597 ProSitePatterns Pectinesterase signature 2. 430 439 IPR033131 -
Pumo4g00582 597 CDD PMEI-like_3 91 241 - -
Pumo4g00582 597 FunFam Pectinesterase 280 595 - -
Pumo4g00582 597 PANTHER PECTINESTERASE 36 585 - -
Pumo4g00582 597 Pfam Pectinesterase 286 581 IPR000070 GO:0030599|GO:0042545
Pumo4g00582 597 SMART PMEI_2 84 235 IPR006501 GO:0004857
Pumo4g00582 597 Gene3D - 280 595 IPR012334 -
Pumo4g00582 597 NCBIfam pectinesterase inhibitor domain 77 239 IPR006501 GO:0004857
Pumo4g00582 597 SUPERFAMILY Pectin lyase-like 284 594 IPR011050 -
Pumo4g00582 597 MobiDBLite consensus disorder prediction 53 83 - -
Pumo4g00582 597 FunFam Pectinesterase 85 240 - -
Pumo4g00582 597 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 87 238 IPR035513 -
Pumo4g00582 597 MobiDBLite consensus disorder prediction 53 78 - -
Pumo4g00582 597 Gene3D Invertase/pectin methylesterase inhibitor family protein 85 240 IPR035513 -
Pumo4g00582 597 Pfam Plant invertase/pectin methylesterase inhibitor 88 235 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00582 Pumo-Chr4 7648523 7651540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00582 1 597 Carbohydrate Esterase AT2G26450 47.658 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00582 - - gmx:100784679 1049.65