LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g00574	ATGCGTTGTCTGCAATTGCAGTTTCAACACCTTCAGGAGAAGGTTCACTGTGAAAATTTTCCAGTACTGGGAAGTGATTATACTATATGCTTCTATGTGATGTGTATGCAGCATCACTGTAGATCCTGTGGGAGAACATTGTGCAGTGAACATTCATCAAATCAAATGGCTTTACCGCAATTTGGCATTTACTCAAATGTCCGAGTATGTGCTGATTGTTTCAACAACTCGTGGTCTGGGAGGGATGTACCACAGACTTCTTCAGATGGAGTAAACAGTGTGACAGATACAATTTCAAATTTAGATATCAATGCAAATGTTGATTCAAAATCCATACCAACTGCAGAGAATAACCTTGTGTCAGGCATTAAAGAGTGTAAGTGTGGAATGCCACTTTGCATTTGTGAAGCTCCAACCCCTTCCTCTGATGCACTCCCCCAGCAGAAACCCAATCCAGTTATTGCAGCTCCATCAAATCCTAAACCTAAGAAGACAGATACAGTTCCGAAAAATAGAAGCTCCAGTTCAACTAGCAAATTTAGTTCTATGTTTAACATTGGTCAAACTAATGGTACCTCAGACAGACCCCAGATTGATTATGAAAATAGTGGAGAGGGTTTAAGAGAAGCAATAAAAAATGGTGACATTGCTGCTGTTAAGAAACTTCTTAATGAGGGTGTGGATGCAAATTATAGGGACAAGCAAGGACTGTCTTTATTACATCTGGCTGCAGTCTTCAATCAAACTGATATAGTTTTCATTCTCATGGATTCGGGGGCAAGCCTGGAGTACAAAAATGCACAAGGAGAAACACCTTTAGATTGTGCACCAGCTACATTGCAATACAAAATGCGAAAGAAGATGGAAGAAGGTGGAGCGATGGACCAAAGCCTTTGA	897	0.4047	MRCLQLQFQHLQEKVHCENFPVLGSDYTICFYVMCMQHHCRSCGRTLCSEHSSNQMALPQFGIYSNVRVCADCFNNSWSGRDVPQTSSDGVNSVTDTISNLDINANVDSKSIPTAENNLVSGIKECKCGMPLCICEAPTPSSDALPQQKPNPVIAAPSNPKPKKTDTVPKNRSSSSTSKFSSMFNIGQTNGTSDRPQIDYENSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLEYKNAQGETPLDCAPATLQYKMRKKMEEGGAMDQSL	298

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g00574	298	MobiDBLite	consensus disorder prediction	169	197	-	-
	Pumo4g00574	298	ProSiteProfiles	Ankyrin repeat region circular profile.	235	266	-	-
	Pumo4g00574	298	Gene3D	-	187	283	IPR036770	-
	Pumo4g00574	298	ProSiteProfiles	Ankyrin repeat profile.	235	267	IPR002110	GO:0005515
	Pumo4g00574	298	Pfam	FYVE zinc finger	31	76	IPR000306	GO:0046872
	Pumo4g00574	298	SUPERFAMILY	Ankyrin repeat	207	278	IPR036770	-
	Pumo4g00574	298	PANTHER	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27	37	292	-	-
	Pumo4g00574	298	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	27	78	IPR013083	-
	Pumo4g00574	298	SMART	ANK_2a	235	264	IPR002110	GO:0005515
	Pumo4g00574	298	SMART	ANK_2a	202	231	IPR002110	GO:0005515

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo4g00574	214	293	MAP Kinase Kinase Kinase	AT3G58760	36.250	1.49e-09	56.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g00574	-		-	gmx:100814367	489.574

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