Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00574 ATGCGTTGTCTGCAATTGCAGTTTCAACACCTTCAGGAGAAGGTTCACTGTGAAAATTTTCCAGTACTGGGAAGTGATTATACTATATGCTTCTATGTGATGTGTATGCAGCATCACTGTAGATCCTGTGGGAGAACATTGTGCAGTGAACATTCATCAAATCAAATGGCTTTACCGCAATTTGGCATTTACTCAAATGTCCGAGTATGTGCTGATTGTTTCAACAACTCGTGGTCTGGGAGGGATGTACCACAGACTTCTTCAGATGGAGTAAACAGTGTGACAGATACAATTTCAAATTTAGATATCAATGCAAATGTTGATTCAAAATCCATACCAACTGCAGAGAATAACCTTGTGTCAGGCATTAAAGAGTGTAAGTGTGGAATGCCACTTTGCATTTGTGAAGCTCCAACCCCTTCCTCTGATGCACTCCCCCAGCAGAAACCCAATCCAGTTATTGCAGCTCCATCAAATCCTAAACCTAAGAAGACAGATACAGTTCCGAAAAATAGAAGCTCCAGTTCAACTAGCAAATTTAGTTCTATGTTTAACATTGGTCAAACTAATGGTACCTCAGACAGACCCCAGATTGATTATGAAAATAGTGGAGAGGGTTTAAGAGAAGCAATAAAAAATGGTGACATTGCTGCTGTTAAGAAACTTCTTAATGAGGGTGTGGATGCAAATTATAGGGACAAGCAAGGACTGTCTTTATTACATCTGGCTGCAGTCTTCAATCAAACTGATATAGTTTTCATTCTCATGGATTCGGGGGCAAGCCTGGAGTACAAAAATGCACAAGGAGAAACACCTTTAGATTGTGCACCAGCTACATTGCAATACAAAATGCGAAAGAAGATGGAAGAAGGTGGAGCGATGGACCAAAGCCTTTGA 897 0.4047 MRCLQLQFQHLQEKVHCENFPVLGSDYTICFYVMCMQHHCRSCGRTLCSEHSSNQMALPQFGIYSNVRVCADCFNNSWSGRDVPQTSSDGVNSVTDTISNLDINANVDSKSIPTAENNLVSGIKECKCGMPLCICEAPTPSSDALPQQKPNPVIAAPSNPKPKKTDTVPKNRSSSSTSKFSSMFNIGQTNGTSDRPQIDYENSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLEYKNAQGETPLDCAPATLQYKMRKKMEEGGAMDQSL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00574 298 MobiDBLite consensus disorder prediction 169 197 - -
Pumo4g00574 298 ProSiteProfiles Ankyrin repeat region circular profile. 235 266 - -
Pumo4g00574 298 Gene3D - 187 283 IPR036770 -
Pumo4g00574 298 ProSiteProfiles Ankyrin repeat profile. 235 267 IPR002110 GO:0005515
Pumo4g00574 298 Pfam FYVE zinc finger 31 76 IPR000306 GO:0046872
Pumo4g00574 298 SUPERFAMILY Ankyrin repeat 207 278 IPR036770 -
Pumo4g00574 298 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27 37 292 - -
Pumo4g00574 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 78 IPR013083 -
Pumo4g00574 298 SMART ANK_2a 235 264 IPR002110 GO:0005515
Pumo4g00574 298 SMART ANK_2a 202 231 IPR002110 GO:0005515
Pumo4g00574 298 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 31 78 IPR017455 -
Pumo4g00574 298 SMART fyve_4 16 79 IPR000306 GO:0046872
Pumo4g00574 298 SUPERFAMILY FYVE/PHD zinc finger 26 87 IPR011011 -
Pumo4g00574 298 MobiDBLite consensus disorder prediction 144 197 - -
Pumo4g00574 298 ProSiteProfiles Ankyrin repeat profile. 202 234 IPR002110 GO:0005515
Pumo4g00574 298 Pfam Ankyrin repeats (3 copies) 209 276 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00574 214 293 MAP Kinase Kinase Kinase AT3G58760 36.250 1.49e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00574 - - gmx:100814367 489.574