Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00566 ATGCCATATAGTAATTTCCATATGCATCAAGACAAGATTGGTTCCTCTTGTTCAAGTGTGTATATATGTTTAATTTTGGCTTCAAATCCTGTAATAGAAGCAGCACACATGGGAGGTTTAGCTAAGACAACTCATCACCTGGTGACCCTGGTGCTGGTAATAGGATTGTGCACCACTATCGTTGAAGGCACCAAACATGTGAGCATCAAGAACAGACTAGGATCTGGGAAGAACATGACCTTGCATTGCCAGTCCAAAGATAATGATCTTGGCAAGCAAAACATAGCATATGGGAATGAATTTGGCTGGGACTTCTCTGACAATGTTACTGGAACCACACTGTTTTTCTGTGATTTGGGGTGGGAAAATGTTGAGGAGTACCATTTTGATGCCTATTCCTTTGCCAGGGACAGGGTGCGATGTGATGCTGGATGTTCATGGATAGTATCGGCTGAAGGGATTTATGGCTTGAATGGACAAACAGGGTACTGGGAATTCATATACCAATGGCCAAATTGA 519 0.4258 MPYSNFHMHQDKIGSSCSSVYICLILASNPVIEAAHMGGLAKTTHHLVTLVLVIGLCTTIVEGTKHVSIKNRLGSGKNMTLHCQSKDNDLGKQNIAYGNEFGWDFSDNVTGTTLFFCDLGWENVEEYHFDAYSFARDRVRCDAGCSWIVSAEGIYGLNGQTGYWEFIYQWPN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00566 172 Pfam Plant self-incompatibility protein S1 66 170 IPR010264 -
Pumo4g00566 172 PANTHER - 61 158 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00566 Pumo-Chr4 7491390 7491908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00566 67 170 Carbohydrate Esterase AT3G16970 34.579 2.29e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00566 - - gmx:102670225 272.322