Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00559 ATGTGCCAAAGAAGCATGAGTGGTGGAGGCATGACGCTGCTGACGATGTTTGTGTTTGTGGGGTTGGTGATTGTGAAATGGGTGGAAGGCTTTGAGGATGCTAATGTGACAGACCTAGACATGCAATATGTCAGTGGAAGAGGTTTCTACTACAGACCTTTGATGGTTGGCCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGGTACCACTTCCACCGTGGATATGGTTCAGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATTAAAAATTGTCTTTACAGTAAGAAAACACGTCATGGTTCATCATATTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAATAAAAATCCGTTATTGTGACGGTGCATCATTTAGTGGGGACAGTCAAAATGCGAGAGCAGGGTTGTATTTCAGAGGGCAACGCATTTGGCAAGCTGCTACAGAAGATTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAATGCTTAAGTGATGCTGGTTTATTCCTTGATTCTGTTGATGTATCTGGTCATCGCAGCTTAAGGAATTTGTTCGGAAGTGTGGTTACCTTACAGGGAGTGCAAAAGAGTCTTCCAAGGAGTTGTACCAGTCGCCTTAATCCAATTTTGTGCTATTTTCCTCAGCACTTAATTGCCGGTGTCAGGACACCACTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTTGCTCCACCATCTGCTGACTACCGTTGGAACTGGTATGAATGCAGAAAAAATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTATAAAAATGGGTTATTCATAAATTCATGTTTCGCCCATTGCCAATCAGAAAGACAGGATACATGGTTTGCTCGTGATTCCCCTCGTATTGGAAATAGAGGGATCGCGGAATCTGTTGGGAACTGGTATTTTGATCGAGTTAGTGTCCAGGCTATTGGCTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTATTTAAGTGA 1260 0.4222 MCQRSMSGGGMTLLTMFVFVGLVIVKWVEGFEDANVTDLDMQYVSGRGFYYRPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSYFMEKQIPFIGILSNKAEENPDFFNWNRIKIRYCDGASFSGDSQNARAGLYFRGQRIWQAATEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGHRSLRNLFGSVVTLQGVQKSLPRSCTSRLNPILCYFPQHLIAGVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKNYARCSAPQIQYLQGFRNQMLRSTRAFSRSYKNGLFINSCFAHCQSERQDTWFARDSPRIGNRGIAESVGNWYFDRVSVQAIGCPYPCDKTCHNLVFK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00559 419 Pfam Pectinacetylesterase 54 398 IPR004963 GO:0016787
Pumo4g00559 419 PANTHER NOTUM-RELATED 36 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00559 Pumo-Chr4 7381218 7387225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00559 55 419 Carbohydrate Esterase AT1G57590 69.041 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00559 K19882 - gmx:100791571 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00559 4 7381218 7387225 Pumo4g00559 4 7381218 7387225 ECH
Pumo4g00559 4 7381218 7387225 Pumo5g03561 5 85003808 85008458 ECH
Pumo4g00559 4 7381218 7387225 Pumo3g02104 3 32722460 32727023 ECH