Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00552 ATGCAGGTGCATGAAGTTGCAAAGAGGATATGGAGTGGGAAGGTAGGTGAACACGAGGCAGAAAAGGAGGAGTTAGTAGATAATTTGAAGCAATTGGAGGAGGTTCTTGGGGACAAGCCATATTTTGGGGGTGACACATTTGGGTTTGTTGATATTGCTTTGATTCCCTTTATTAAATGGTTCTCTAGTTATGAGAAAGTAGGCAATTTCAAGCTGGACTGTCCAAAACTCATTCCTTGGGCAAACAGATATTTGGAGAGAGAGAGAGTGTTTCCAAATCCGTTTCTGATGAGAAGGATGTCTCTGAGTTTGTTCTGA 318 0.4182 MQVHEVAKRIWSGKVGEHEAEKEELVDNLKQLEEVLGDKPYFGGDTFGFVDIALIPFIKWFSSYEKVGNFKLDCPKLIPWANRYLERERVFPNPFLMRRMSLSLF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00552 105 CDD GST_C_Tau 2 93 IPR045074 GO:0004364|GO:0006749
Pumo4g00552 105 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 90 IPR045073 -
Pumo4g00552 105 Pfam Glutathione S-transferase, C-terminal domain 19 81 - -
Pumo4g00552 105 SUPERFAMILY GST C-terminal domain-like 9 91 IPR036282 -
Pumo4g00552 105 Coils Coil 15 35 - -
Pumo4g00552 105 Gene3D - 1 99 - -
Pumo4g00552 105 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 104 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00552 Pumo-Chr4 7306636 7306953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00552 2 90 Glutathione S-transferase Gene Family AT1G17180 56.044 2.62e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00552 K00799 - gmx:100781460 162.54