Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g00545 | ATGGGACTTGACACGAGTGTTGGAGAGCATGGTACACAGCTCTCTGGGGGTCAAAAGCAAAGAATTGCCATAGCAAGGGCAATTCTGAAAGATCCAAAAATTCTACTCCTTGATGAAGCTACAAGTGCCCTTGATGCTGAGTCTGAGAGAGTGGTGCAAGAAACACTAGACAAAATTATGATAAACCGAACAACTGTCATTGTAGCACACCGCCTAAACACAATAAGGAATGCTGATACCATTGCCGTTATTCATCAAGGAAGAGTAGTAGAAAATGGTACACATGCTGAGCTCATTAACGATCCAGATGGAGCTTATAGCCAGCTCATTAGATTGCAAGAAATTAACAGGCAGTCAGATGGTACAAATGACTCAGGCAGACTAGAAAACTTCATAGATTCTGAACGACAATCAAGCCAACAGTTTCCTTTCCCTCAATCTTTATTCCAGGGATCATCCGGAATAGGAAACAGAAATCGTCACTCATTCGAAATATCAAATGCTATGCCTACTACACTTGATCTCTTGAAAACATCAGAAGGAGGACCTGAAGTTCTTCCTCCAGCAAAACTGTATGAGGAAGCAAGTCAAATAGCGAATGACGCGGTAGGGAATATCAGAACAATTGCTGCTTTTTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTTTAGGACCCATCCAGACAGGTATATGGCAAGGTTTAGTCAGTGGAACAAGTTTCGGGTTATCACTCTTCCTTGTGTTCTCAGTTAATGCATGCAGTTTTTATGCTGGAGCCCAACTTGTTGAGAATGGCAAAACATCAATCTCAGATGTTTTCCGTGTGTTTTTCACTCTCACAATGGCAGCTATAGCAATTTCACAATCTGGCTTCATGGCCCCCGGTGCGAGCAAAGCAAAAAGTTCTGTTGCTTCTATATTTGCTATTCTTGACCAGAAATCAAGAATAGATCCCACTGATGAGTCTGGAATGACATTGCAAGAAGTGAAGGGAGAGATTGAGTTCCACCATGTCACTTTCAAGTATCCAACCAGGCCTAATGCTCTTGTATGCAGAGATCTTTCCTTGACCATTCATGCAGGAGAGGGTTATGACACATTAGTGGGGGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGGGTGGCAATTGCAAGAGCCATAGTGAAGAGTCCAAAAATATTACTACTAGATGAAGCCACCAGTGCACTTGATGCTGAGTCTGAAAGAGTGGTTCAGGATGCACTTGACCGAGTGATGGTGGATAGAACCACAATTGTGGTGGCTCACAGGTTATCCACCATAAAGGATGCAGATTCAGTAGCAGTGGTTCAAAATGGAGTCATCGCTGAGCAAGGAAAACATGACACTTTGCTTAACATGGGTGGTATCTATGCTTCATTAGTAGGCTTGCACACAAGTCTTGCTTCATCTTAG | 1452 | 0.4311 | MGLDTSVGEHGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQETLDKIMINRTTVIVAHRLNTIRNADTIAVIHQGRVVENGTHAELINDPDGAYSQLIRLQEINRQSDGTNDSGRLENFIDSERQSSQQFPFPQSLFQGSSGIGNRNRHSFEISNAMPTTLDLLKTSEGGPEVLPPAKLYEEASQIANDAVGNIRTIAAFCAEEKVMELYQKKCLGPIQTGIWQGLVSGTSFGLSLFLVFSVNACSFYAGAQLVENGKTSISDVFRVFFTLTMAAIAISQSGFMAPGASKAKSSVASIFAILDQKSRIDPTDESGMTLQEVKGEIEFHHVTFKYPTRPNALVCRDLSLTIHAGEGYDTLVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDRVMVDRTTIVVAHRLSTIKDADSVAVVQNGVIAEQGKHDTLLNMGGIYASLVGLHTSLASS | 483 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g00545 | 483 | Pfam | ABC transporter | 4 | 42 | IPR003439 | GO:0005524 | |
Pumo4g00545 | 483 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 365 | 476 | IPR027417 | - | |
Pumo4g00545 | 483 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 206 | 476 | IPR003439 | GO:0005524 | |
Pumo4g00545 | 483 | Gene3D | - | 1 | 129 | IPR027417 | - | |
Pumo4g00545 | 483 | Gene3D | ABC transporter type 1, transmembrane domain | 189 | 355 | IPR036640 | GO:0005524|GO:0016020 | |
Pumo4g00545 | 483 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 189 | 302 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pumo4g00545 | 483 | Pfam | ABC transporter | 363 | 407 | IPR003439 | GO:0005524 | |
Pumo4g00545 | 483 | Gene3D | - | 363 | 480 | IPR027417 | - | |
Pumo4g00545 | 483 | SUPERFAMILY | ABC transporter transmembrane region | 191 | 321 | IPR036640 | GO:0005524|GO:0016020 | |
Pumo4g00545 | 483 | ProSitePatterns | ABC transporters family signature. | 379 | 393 | IPR017871 | GO:0005524|GO:0016887 | |
Pumo4g00545 | 483 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 113 | IPR027417 | - | |
Pumo4g00545 | 483 | PANTHER | ABC TRANSPORTER B FAMILY | 2 | 117 | IPR039421 | - | |
Pumo4g00545 | 483 | Pfam | ABC transporter transmembrane region | 192 | 287 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pumo4g00545 | 483 | FunFam | ATP-binding cassette protein subfamily B, member 2, putative | 231 | 334 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g00545 | Pumo-Chr4 | 7221903 | 7226903 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g00545 | 359 | 477 | Calmodulin-binding Proteins | AT2G36910 | 61.983 | 2.42e-41 | 156 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g00545 | K05658 | - | nnu:104586067 | 342.428 |