Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00529 ATGGGTTGCTTTGGCTTCTGCAAAGGAGATGATAGTGTTACAGTCGCTGACAGAGGACCTTTCACACAAAGCACTCCTACTGGGAACTCCAGTTATCATGGCAGACACACAGCAGTAACTGCTCCTCGGACTATAAATTTTCAACCTATTGCTGTCCCTTCCATAGCAGTAGATGAATTGAAGTCTTTGACAGATAATTTTGGCTCAAAATCTTTCATTGGTGAGGGTGCATATGGGAAAGTATATCATGCCACATTGAAGAATGGGCGTGCAGTGGTAATCAAAAAGTTAGATTCCAGTAATCAACCAGAGCAAGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTGAAGCATGAAAATGTTGTTGAGCTTGTTAACTATTGTGTTGATGGTCCTTTCCGTGCCCTTGCCTATGAGTATGCTCCTAAAGGATCCCTTCATGATATTCTACATGGACGCAAAGGTGTCAAGGGTGCACAACCTGGTGCAGTTCTCTCATGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCAGCCAGGGGACTTGAATATCTTCATGAAAAGGCAGAGATTCACATAATCCATCGTTACATTAAGTCTAGTAACATACTTCTTTTTGATGATGACGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACCCGTGTTCTTGGGACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAACTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATACTGCTGGAACTCTTAACAGGGCGTAAACCCGTTGATCATACACTGCCCAGGGGACAGCAAAGCCTTGTGACCTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCAAAGTCAGTTGCAAAGGTAATTAGGCTATATTCTGGAAATGGAGAATATATTGTCTTTTAG 996 0.4247 MGCFGFCKGDDSVTVADRGPFTQSTPTGNSSYHGRHTAVTAPRTINFQPIAVPSIAVDELKSLTDNFGSKSFIGEGAYGKVYHATLKNGRAVVIKKLDSSNQPEQEFLSQVSIVSRLKHENVVELVNYCVDGPFRALAYEYAPKGSLHDILHGRKGVKGAQPGAVLSWAQRVKIAVGAARGLEYLHEKAEIHIIHRYIKSSNILLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKVIRLYSGNGEYIVF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00529 331 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Pumo4g00529 331 SUPERFAMILY Protein kinase-like (PK-like) 46 320 IPR011009 -
Pumo4g00529 331 ProSiteProfiles Protein kinase domain profile. 67 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00529 331 Pfam Protein tyrosine and serine/threonine kinase 72 277 IPR001245 GO:0004672|GO:0006468
Pumo4g00529 331 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Pumo4g00529 331 FunFam Pti1 kinase-like protein 43 141 - -
Pumo4g00529 331 FunFam pto-interacting protein 1 143 323 - -
Pumo4g00529 331 Gene3D Transferase(Phosphotransferase) domain 1 143 324 - -
Pumo4g00529 331 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 35 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00529 Pumo-Chr4 7026424 7030864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00529 55 321 Receptor kinase-like Gene Family AT4G02010 50.554 5.11e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pumo4g00529 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00529 K13436 - gmx:547596 622.854