Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00498 ATGGGTGTGTATCTGTCGGAAGGGGCGTTAAAGAGACTGTCGAGAGAGAATTTCTGTGGGGAGGAGATGTTGAAGATGAAGACGGTGCTACAGGTTATCGAATTGAAACCGCTTTCCGACTACCGTTACCGCCTTTTGCTCTCAGATGGTTCTCACCATATGTTTGGGGCTCTCTCCAAGATGAAGAACGACCTGATCCATTCCGGAAGGTTACAGCAAGGCTCCGTTGTTATGCTTACAAAGTTCAAGGTCACTGAAATTGCGTGCGGCAAACCCAAGCTTATCCTCGTTCATGACCTAGATGTTATGGTGGACAAATTTGACCTGATTGGAGAACCTATCCCTGCACCAAATACTCTCACTTGGCCCTTGATCGATCAATCTGCAGATGCCATAACTGCTTCATTGAAGGCCTTATCTCTCGATCTCACTCTCACTCTATAA 444 0.4662 MGVYLSEGALKRLSRENFCGEEMLKMKTVLQVIELKPLSDYRYRLLLSDGSHHMFGALSKMKNDLIHSGRLQQGSVVMLTKFKVTEIACGKPKLILVHDLDVMVDKFDLIGEPIPAPNTLTWPLIDQSADAITASLKALSLDLTLTL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00498 147 Pfam Replication factor-A protein 1, N-terminal domain 6 104 IPR007199 GO:0003677|GO:0005634|GO:0006260
Pumo4g00498 147 SUPERFAMILY Nucleic acid-binding proteins 1 111 IPR012340 -
Pumo4g00498 147 Gene3D - 4 116 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00498 Pumo-Chr4 6648031 6648761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00498 1 116 Core DNA Replication Machinery Family AT4G19130 34.426 5.17e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00498 K07466 - gmx:100778597 98.9821