Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g00496 | ATGGATGAAGTCTTCCAAGGTTACTCCGGAATTGACATATTCAACATTTATGCCCCGGCATGTCGTCTAAACAGCACATCCTCAGTGGCTGATGATAGCAACGGTAACAGCCCTGAATCATTTAATAAGGTGAGAAATGATCATAAATTAAGGAGGATGAGAAACTTTGGAGGCTATGATCCTTGTTATTCCAATTATGCAGAAGAATATTTCAATAGAAAAGATGTTCAGTCCTCTTTTCGTGTAGATGCTAAAAGAGCCACTAAAGTGACATGGCAGGTTTGCAATAATTCCCTATTCGAGTCTTACAAGATCTCTGTTTTTTCGGTCCTACCTATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGATGCAGATGGCAGAGTACCGGTGATAGGGACACGATATTGTGTTGAGGCTCTCGGATTACCTGTCAAGTCTAGATGGCGAAATTGGTACCATGATAATCAGGTTGGAGGAAGAATAGTTGAATACGAAGGGTTGACATATGTGACAGTAAGAGGAGCTGGTCACATGGTGCCACTTAACAAGCCCAGTGAGGCTCTTTCCCTAATTCATTCTTTCTTAACAGGCGACCATCTTCCTACTCGTGGATAA | 636 | 0.4198 | MDEVFQGYSGIDIFNIYAPACRLNSTSSVADDSNGNSPESFNKVRNDHKLRRMRNFGGYDPCYSNYAEEYFNRKDVQSSFRVDAKRATKVTWQVCNNSLFESYKISVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPVKSRWRNWYHDNQVGGRIVEYEGLTYVTVRGAGHMVPLNKPSEALSLIHSFLTGDHLPTRG | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g00496 | 211 | SUPERFAMILY | alpha/beta-Hydrolases | 49 | 208 | IPR029058 | - | |
Pumo4g00496 | 211 | Gene3D | alpha/beta hydrolase | 5 | 208 | IPR029058 | - | |
Pumo4g00496 | 211 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 9 | 191 | IPR001563 | GO:0004185|GO:0006508 | |
Pumo4g00496 | 211 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 174 | 191 | IPR033124 | GO:0004185 | |
Pumo4g00496 | 211 | FunFam | Carboxypeptidase | 110 | 204 | - | - | |
Pumo4g00496 | 211 | FunFam | Carboxypeptidase | 59 | 207 | - | - | |
Pumo4g00496 | 211 | Pfam | Serine carboxypeptidase | 9 | 203 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g00496 | Pumo-Chr4 | 6623120 | 6625036 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g00496 | 63 | 207 | Calmodulin-binding Proteins | AT2G22960 | 27.397 | 2.06e-15 | 69.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g00496 | K16297 | - | gmx:100815141 | 379.022 |