Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00448 ATGGTTGACACTTTGAGTATAGAGAGCAGGCTTCTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAACTGTGGGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTCCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTCGGTGTGGTTCGAGGGTGCATTAAGAGCATGCGAACTCCTTCTGAATCATTGCTGAAGATAGGTTGCATACTAGGCCTTAGGGTCTCTCCTACACACAGGAGAAAGGGGGTTGGACTAAAACTTGTAAACTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTTCTAGCAACAGAAAAGAACAATGATGCCTCTATAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTAGTCATATTTGTCCATCCAATTAGTTTCCCTGCAAAGCACATTTCCAAGGATATAAAAATTGAGAAGGTGAACATAGACCAGGCAATTTCCTTATACAGAAGAACCCTGAGGGCCAAAGAGTTGTACCCATTAGACATGGACTCCATTTTGAAGGAGAAGCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGATGAAGGCTGCAGGCTCAACTTGCAGAGGAAGATAGAGACTGAAGACATAATCACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTATAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGATTTCTTCACACAACTTTAAATCATGCAAGAGACAAAATTTTCCCTTGTCTCAGAATGTCGGTGAGTGAATCACTCTGCAGACCCTTTGGGTTTCTCTTCCTCTATGGACTCCATGGAGAGGGAGAGAATCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCGAGGTTGGGAGAAAGCTTGAACGACTGCAGAGTGGTTATAACTGAGTTAGGGTTTGGGGATGCGCTTGTAAACCATGTCCCTCAAACAGCTTCTATGTCGTGTATCGATGATATTTGGTACACGAAAAGAATTTCAAGCCACAGTGATGGAAAAGGATGA 1140 0.4298 MVDTLSIESRLLIREFDEDRDVKVVGKLERNCGIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPTHRRKGVGLKLVNSVEEWMLRNGAEYAFLATEKNNDASINLFTNKCKYVSLSSLVIFVHPISFPAKHISKDIKIEKVNIDQAISLYRRTLRAKELYPLDMDSILKEKLSLGTWVSYYKDEGCRLNLQRKIETEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSESLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRLGESLNDCRVVITELGFGDALVNHVPQTASMSCIDDIWYTKRISSHSDGKG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00448 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 235 IPR000182 GO:0016747
Pumo4g00448 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 377 - -
Pumo4g00448 379 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
Pumo4g00448 379 CDD NAT_SF 62 133 - -
Pumo4g00448 379 Gene3D - 43 163 - -
Pumo4g00448 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00448 Pumo-Chr4 5952546 5954142 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo4g00448 Acetyltransf_1 3.1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00448 - - gmx:100814448 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00448 4 5952546 5954142 Pumo4g00448 4 5952546 5954142 ECH
Pumo4g00448 4 5952546 5954142 Pumo2g01274 2 18204801 18206560 PCT