Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00420 ATGAGAGTTGAGAAAGAAGGAGCAAAAAATGAAGGTGGATACGTTGGTGGTTTCTTCCACTTGTTTGACTGGACCTCAAAATCTCGTAAGAAATTATTTGCAGCCAATTCAGATTTTCCAGAGTCCTCGAAACAGAGAAGAAAAGTTGATGGCAACTTGGCAACGATGCTGCCCTATCTGGTGGACGAAGATGATGAAATTGGAGTAGGGAAAGGTATTAGAGAAATTAGTGATCGTAGTTGTGCTTCATCTGTTATAGATGATGAAGTTTGTGGAACAAGGTCCCCTGGTGTAGTTGCCAGGCTTATGGGATTAGATTCATTGCCCTCTTCCAGTTTTCCTGATCCATATTCTTCCCCATACTTCGACAGCCAATCTCTTCAAGAAGTGCAGTACTGGAGGACAAAATTCAATCATCTGCATGACCATCAGATCCTATATTCTGGAAAGTTGATTGAAAAAGCCGAGGGATCTTCTAGGAACTTCATGGAGGCTAAGCCTCAACAGACCCGTAGCAGGCCAATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAGTCAGCTAAATCTATTCCCCTTACACACCATAAACTTTTGTCCCCAATTAAGAGCCCTGGCTTTATTCCAGCAAATAATGCTACTTACATAATGGAGGCTGCTGCAAGAATTATTGAACCTGGCTCCCAAGCTACTACAAAGGCTAAAACATCTCTGGTAGCATCATCAACTGTATCATTGAGGGTTAGAGATCTTAAAGAAAAAGTGGAGGCTTCACAAAAAGGACCTCTAATTGGGTCATCTTCGCTGACTTCTAGAGTTAGAGATCTAAAAGAAAAAAGAGAAACTTCTCATAGAACTAGCAGGCTTTCGGAACCTTCTCAAAGGTCGGCTGAGTCTAATGATGCCAAGTATCTAAAGGGACAATCTTTCAACAGAAGTTGGAATGGATCTGTGGATACACTTGTCAGATCATCTACTCAAGTTGAAGAAGATTCTTCTTTGAAAAATAAAGGGAAGTCTATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGTTTGGTGGAGCAGAAGGAACAATGTGACATTAAAACCCCCCAGCAGCCTCTGAAGGGTAATGTTCAAAAAAGTTTGCATAAGAAATCCTCTGGTCAAGATGTTTCTGGTGTTCTCAGGCAGAATAATCTGAAACAGAATTGTTCAATGGATAAAGACAAACTACCATCAAAGCCACTGGTTTCCAATTCACACAGTAGAAAAGTTGTGACTGGGGATTCCTCTTGTGGACGTCATAGAAGCTCTAGTAGTAAATCCGTTGCAAAATCTAAAGTTGGGCCCAAAAAATCATCCATGAATGTGACAGATAGTGAAAAGGAAGTTTTATATACCCGTACCAACAATTTCCCAAGGAAGAAGAGGTCCACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTGTTTATTGACAAAACTCAGAAGCCTGTTCAGAGTAATCTAGTTAGTAGTAAACACCATGGTGGGGCTGAAGAAGTCAAAAATAAAGACATGGATGTAGTTTCCTTCACATTTACCACGCCATTGACAAGATGCAATTCTGGTTTTGAGACATCTGGACAAACTGGCCTGAAGACTAATAGCCTTTCCTTGGATCAGCATATCAGAAGAGTGTTGCTTGACACTGACACTGATAGTACAAGGTCTCCGATAGGATACAATGCGATTGGTGGTGATGCCTTAGGTATCCTTTTGGATCAGAAGCTGAGGGAATTAACATATGGAGTTGAGAACTCTTGTGATGATTCCTTCAAAGCAATGTCACCTTCCAGTACTGCACCAAAATCAAAAGATCTGGTTCCCACCCTTAATTCAGTTAACCTCTTTCCGCGGTTGCAACAGAAGAAAGACCAAGACATGATGTGGACAGATAAGTTATTCAGTAGCCGTGAGTGTGACATTTCCTTCACTTGTCTTCCAGAAATATCATCCAAGCATAGACTCCGGGTTGATAAGATGAAGGAGTGTCAGATCAATCCTATGGAAGCAGAGTTATTCAGTCCCGGACAGCCAAGTCCAATGTCTGTTCTTGACCCTTCCTTCTCTACTGAAAGCTGTGAATCTCCATTCAGCACAAATGCTGCTAGTTCAGAAGATCAAAGCAGAAGGAAGCAAGTTGTGGGCTCAGCATCAACTTGGACCATGCTAAAGAAACATGCAAGCACATGTTCTCAAATGAAATTTGGACAATCAAGTACATGGGAGCTAGATTATGTGAATGATATATTGTGTAACGTGGAGTTGATGTACATGGACTTTTCTCTTGGTAGAGCTCGTGAGATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAGTCGAAGGGGAAGAAGGTTTGAGAGTGATGGTGGTGACTGTAGGATGAGAAGGAAAGTCATATTTGATTGTGTGAGCGAGTGTTTGGACTTAAGATGCAGGCGTTATGTTGGTGGGGGGTACAAAATGTGGGCCAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTAGCAAGGGAAGTGTACAAGGAAATTTCAAGTTGGAGGGATATGGGGGATTCAATGGTGGATCAACTCGTAGATAGGGACATGAGCATCGAATATGGACGATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCACTCCTTGAAGACCAAATATTTAATTCTTTGGTTGATGACTTCGTTGCTGAAGTCCTGCAATTATAA 2778 0.4143 MRVEKEGAKNEGGYVGGFFHLFDWTSKSRKKLFAANSDFPESSKQRRKVDGNLATMLPYLVDEDDEIGVGKGIREISDRSCASSVIDDEVCGTRSPGVVARLMGLDSLPSSSFPDPYSSPYFDSQSLQEVQYWRTKFNHLHDHQILYSGKLIEKAEGSSRNFMEAKPQQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKSPGFIPANNATYIMEAAARIIEPGSQATTKAKTSLVASSTVSLRVRDLKEKVEASQKGPLIGSSSLTSRVRDLKEKRETSHRTSRLSEPSQRSAESNDAKYLKGQSFNRSWNGSVDTLVRSSTQVEEDSSLKNKGKSISLAIQAKVNVQRREGLSFSSGKSLVEQKEQCDIKTPQQPLKGNVQKSLHKKSSGQDVSGVLRQNNLKQNCSMDKDKLPSKPLVSNSHSRKVVTGDSSCGRHRSSSSKSVAKSKVGPKKSSMNVTDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKTQKPVQSNLVSSKHHGGAEEVKNKDMDVVSFTFTTPLTRCNSGFETSGQTGLKTNSLSLDQHIRRVLLDTDTDSTRSPIGYNAIGGDALGILLDQKLRELTYGVENSCDDSFKAMSPSSTAPKSKDLVPTLNSVNLFPRLQQKKDQDMMWTDKLFSSRECDISFTCLPEISSKHRLRVDKMKECQINPMEAELFSPGQPSPMSVLDPSFSTESCESPFSTNAASSEDQSRRKQVVGSASTWTMLKKHASTCSQMKFGQSSTWELDYVNDILCNVELMYMDFSLGRAREIVNPHLFNQLESRRGRRFESDGGDCRMRRKVIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLAREVYKEISSWRDMGDSMVDQLVDRDMSIEYGRWLDFEVDTFQLGALLEDQIFNSLVDDFVAEVLQL 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00420 925 MobiDBLite consensus disorder prediction 703 733 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 272 288 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 422 467 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 255 304 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 694 733 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 359 467 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 359 413 - -
Pumo4g00420 925 MobiDBLite consensus disorder prediction 289 304 - -
Pumo4g00420 925 Pfam Domain of unknown function (DUF4378) 765 917 IPR025486 -
Pumo4g00420 925 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 921 - -
Pumo4g00420 925 Pfam DUF761-associated sequence motif 83 113 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00420 Pumo-Chr4 5581743 5586579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00420 16 923 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.083 7.59e-94 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00420 - - gmx:100804990 1590.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00420 4 5581743 5586579 Pumo2g01320 2 19329570 19335138 PCT