Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00396 ATGGTTCTTTTTCCATCCTTTGTGAATGGATTGGCGAGAACTGTGTCAATGAAGAAAGAGAAGACTTGTCAAAAGGAAGATGGAAGAAAAGCTGTGGAAGAATTGGTAAAGGAAGCAAAGAAGAATGAATTGTTATTAAGTTCATCTGGAGTTGTTAAGTCAACCAAGGCCAACAATTTTGTTTCTATGTTCACTAATAAGGGCCAGAAAGGAGTCAATCAGGATCGTCTTCTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAGTTTTTGATGGGCATGGCCCATGGGGACACTATGTAGCCAAAAGGGTCAGGAAACTAGTACCAGCCTTTTTGCTCTGCAATTGGCAGGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAGATGGAAGCAGACAAATATATCCATGGATTGGACATATGGAAGCAATCTTACATAAAGACTTGTGCTGCTGTTGATCAGGATCTGAAGCAGCACACTGGGATTGATTCCTTCCTAAGTGGCACTACAGCATTGACAATTATCAAACAGGGTGAATATCTTATTATAGCAAACATAGGTGATTCTAGGGCTGTCTTGGCAACCACTTCAGATGATGGCACATTAACTCCATGTCAGCTTACCACTGACTTCAAGCCAAATTTACCACATAGGAGTATCATATTTGGTTGGTGTAATTGTAATGGCATTAGAGTGAGCACGCCACTTGTCTATATAGTATGGGATGTTATATCCAACCAGGAAGCAGTGAAGATTGTTTCTGCAACTCCACACAAAGAAAAAGCAGCCCAAAGGCTCGTGAAATGTGCCATAAATGAATGGAAACGGAAGAAAAGTGGCATTGCTATGGATGATATGTCAGCTATTTGCCTCTTCTTTCACTCTTCCCCCTTTCATCAACTCCGAGCCATTAAAAGTGTTGACTAG 948 0.4114 MVLFPSFVNGLARTVSMKKEKTCQKEDGRKAVEELVKEAKKNELLLSSSGVVKSTKANNFVSMFTNKGQKGVNQDRLLVWEEFGCQQDMMFCGVFDGHGPWGHYVAKRVRKLVPAFLLCNWQENLAATSLDLDFKMEADKYIHGLDIWKQSYIKTCAAVDQDLKQHTGIDSFLSGTTALTIIKQGEYLIIANIGDSRAVLATTSDDGTLTPCQLTTDFKPNLPHRSIIFGWCNCNGIRVSTPLVYIVWDVISNQEAVKIVSATPHKEKAAQRLVKCAINEWKRKKSGIAMDDMSAICLFFHSSPFHQLRAIKSVD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00396 315 CDD PP2Cc 59 300 IPR001932 -
Pumo4g00396 315 SUPERFAMILY PP2C-like 54 301 IPR036457 -
Pumo4g00396 315 Pfam Protein phosphatase 2C 85 223 IPR001932 -
Pumo4g00396 315 Gene3D - 21 227 IPR036457 -
Pumo4g00396 315 Gene3D - 246 307 IPR036457 -
Pumo4g00396 315 SMART PP2C_4 51 298 IPR001932 -
Pumo4g00396 315 PANTHER PROTEIN PHOSPHATASE 41 223 IPR015655 GO:0004722|GO:0006470
Pumo4g00396 315 ProSiteProfiles PPM-type phosphatase domain profile. 60 300 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00396 Pumo-Chr4 5318089 5321054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00396 1 301 PP2C-type Phosphatase Gene Family AT3G05640 48.169 2.01e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00396 - - gmx:100817397 422.165