Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00386 ATGGCAATCGAAGATGGCAAAGAAATCGAATCAAAAGACTATGGCCTCAGCGGCAAGATAATGCTAATCGCCATTGTTTTTCTCTTCATCGTTATCATCATAATGCTTTGCCTCCACGTCTACGTCAGGTGGCGCCTCGTAAACGCTCGCCGCCGGCAACAGCTCCGCCGCAGTAACCGGCCGCAGTTCGTGTTCTACATGGACCCGGCCGCCCGCATTGCCCTCGCGAGGCGGGGGCTCCACCCCTCCGTGATCTCCACGCTCCCGGTGTTCACGTTCTCCGCCGCGAACCAACCAACGGAATGCGCGGTTTGCTTATCGGAGTTCGAGAACGGGGAAACGGGTCGGGTCTTGCCCGAAATGCAATCACAGTTTCCATACTGA 384 0.5651 MAIEDGKEIESKDYGLSGKIMLIAIVFLFIVIIIMLCLHVYVRWRLVNARRRQQLRRSNRPQFVFYMDPAARIALARRGLHPSVISTLPVFTFSAANQPTECAVCLSEFENGETGRVLPEMQSQFPY 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00386 127 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 15 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00386 Pumo-Chr4 5226751 5227134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00386 4 125 Rapid Response to Elicitors AT3G16720 51.938 3.88e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00386 - - gmx:100800859 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00386 4 5226751 5227134 Pumo4g00386 4 5226751 5227134 ECH
Pumo4g00386 4 5226751 5227134 Pumo2g01363 2 20366008 20367497 PCT