Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00375 ATGGGTGGCCAGATGCAGCAGAGCAATGCCGCCGCCACTGCTCTGTATGACCATGCCGGCGCCGGATCCCTGCACAATGCGGCAGGGCCGGCCACCGATGCCGGCGACGCCGTCATGGCGCGCTGGTTACAATCCGCCGGCTTGCAGCATCTGGCCTCTCCATTGGCTTCCACTGGCATCGATCAACGCCTCCTCCCCAACCTTCTTATGCAGGGTTATGGAGCACAGTCTGCAGAAGAAAAGCAGAGGCTTTATAAGTTAATGAGAAACCTCAACTTTAATGGGGAATCTGGTTCTGAGCCATATACACCCACTTCCCAAAATTTAGGTGGAGTGGCTGTATCAGATGCGTTTTATTCTCCAGACTTTAGGGGAGATTTTGGAGCTGGGCTTTTGGATCTTCATGCCATGGATGATACAGAGCTTTTGTCCGAGCATGTTATTTCAGAACCATTTGAGCCATCACCCTTTATGCCTGGAGGCACTAGAGTTTTTGAAGATGACTTCAATCCAATTAGCAGAAAGCAGGAAAGAGAAGCAGATTCTGATGCATCGCTTTTCTTACCTACGAATGAAAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATATGATAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTCTTGACGAGAATGTCACCAATGATGAAGTATATCGAGTTACAGTAGAACCAATTATTCCTACAATTTTTGAGAAAACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCATTGCCGCTCAGAGCTGCAGAAGACCTTGTTAGACAGTTGCATCGACCAGTATATCGAAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGACAGAAAGAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCGGCAAGAAGTACAGGGTCAACTGGTGCGAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAGGCACAACGAGGTAAAAGAGAGCAAGCGGAACAATAATGATGTAAATGAGGCAAGAAGTGGGAAGGTTGTGGGGAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAGACAAGGATTGAAGGTGCTGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAGCTTACAGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCAAAAACTGTTATGATCTCTTGTATATCCCCAAATGCTGGGTCATGTGAACACACACTTAATACCTTGAGATATGCAGACCGGGTTAAAAGTCTATCCAAGAGTGGAAATCCTAGAAAGGACCAGGCCCCAAATCCAGTACCACCAGCAAATAAAGAGGTTTCATCCACATCTTCACTTCCAGCTAGTGTTGGTGCAGAGGATTTTAATGGTCAACGCCAAGAGGTAAAAACAATGGACATGGGCAGGAAAGTTGTTGAAAAGGAAAGTTCTTTGTACAGCTCTGCTGCTGACGTTGACAAACAATCAAGTTTTTCTTCTAGTTATCCATTCAATGGGCGAGAGGAAAAAAACTTGGCTTCTGCCCCAGTGAACAGGGAAAGGTTTGAAGTAAAGAATTCTTACGGTGATTCTACCAGTCAAAAGATGAACTCTTATTCCCTAAATGTTACAGATGAGAAAGTGCAAAGGGCGTCTCCCCCACGCAGAAAAGGGACTAAGGAGGAGAAATCTGAAAGATCTGTAAATTGGGTAAAACGGGATGCCAATGGTTCTGATCATTTCACAACAAGCTCCAAGCAGCAGAGTACAGGAAATTTTAACACAGTTACCACTGGATCGGGGCAGTCTGAAACAGAATCCTCTTCTGATGTGAATATCAGCGCAATACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTACTGGCAGAAGTGGACCAGCCAGGAAGTCTTATTGACAACTACGTAACCCAGTTGAGTTTTGTGCTTTCTCGCAAAGCGGCTAGCCTCGTCAGTCTTCAAGCTCGCCTGGCAAGATTCCAACATCGACTAAAAGAACAAGAGATACTGAGTAGAAAAAGAGTACCCCGTTAA 2445 0.4344 MGGQMQQSNAAATALYDHAGAGSLHNAAGPATDAGDAVMARWLQSAGLQHLASPLASTGIDQRLLPNLLMQGYGAQSAEEKQRLYKLMRNLNFNGESGSEPYTPTSQNLGGVAVSDAFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGTRVFEDDFNPISRKQEREADSDASLFLPTNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFEKTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESKRNNNDVNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVPPANKEVSSTSSLPASVGAEDFNGQRQEVKTMDMGRKVVEKESSLYSSAADVDKQSSFSSSYPFNGREEKNLASAPVNRERFEVKNSYGDSTSQKMNSYSLNVTDEKVQRASPPRRKGTKEEKSERSVNWVKRDANGSDHFTTSSKQQSTGNFNTVTTGSGQSETESSSDVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00375 814 CDD KISc_KIF2_like 204 537 - -
Pumo4g00375 814 MobiDBLite consensus disorder prediction 603 621 - -
Pumo4g00375 814 Coils Coil 731 762 - -
Pumo4g00375 814 MobiDBLite consensus disorder prediction 556 572 - -
Pumo4g00375 814 MobiDBLite consensus disorder prediction 690 724 - -
Pumo4g00375 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 539 IPR027417 -
Pumo4g00375 814 ProSiteProfiles Kinesin motor domain profile. 204 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 PANTHER KINESIN-RELATED PROTEIN 6 32 812 IPR027640 GO:0003777|GO:0007018
Pumo4g00375 814 MobiDBLite consensus disorder prediction 539 590 - -
Pumo4g00375 814 ProSitePatterns Kinesin motor domain signature. 438 449 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo4g00375 814 MobiDBLite consensus disorder prediction 641 661 - -
Pumo4g00375 814 SMART kinesin_4 202 545 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 MobiDBLite consensus disorder prediction 663 687 - -
Pumo4g00375 814 Gene3D Kinesin motor domain 184 542 IPR036961 -
Pumo4g00375 814 PRINTS Kinesin heavy chain signature 439 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 PRINTS Kinesin heavy chain signature 285 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 PRINTS Kinesin heavy chain signature 489 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 PRINTS Kinesin heavy chain signature 395 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 Coils Coil 787 807 - -
Pumo4g00375 814 Pfam Kinesin motor domain 210 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g00375 814 MobiDBLite consensus disorder prediction 603 724 - -
Pumo4g00375 814 FunFam Kinesin-like protein 183 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00375 Pumo-Chr4 5070484 5079545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00375 196 539 Calmodulin-binding Proteins AT5G65930 33.989 4.48e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00375 K10393 - gmx:100778915 1505.35