Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00369 ATGTGCAGTTCATTCAGCATGGAGGAGCCTCAGTACCGCGAACATCCCAAAGCCAAAATCACGACCATTCCGCCGCCGCAGCAGCACTCCGACGGCGCCACCGCCGAGTTGCGCGGTGTCGATTGCAACCTCGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCTGGTTCCTTCTCCGATATCGTCGTCAATGCCATGGGTTCCACTTATCATCTCCATCGTCTCATCCTCTCTCGCAGTTCGTATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCCAGTGCTCCTGTTGTGACTCTGCATGTTGATGATAAGAATGTTAATGATGACGCAATTGCAATGGCTTTGGCATATCTATACGGACACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGGAATTTGTACGGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGCTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCACTACTTACTTCTAATGATCTTTGGATACCCAATGAAGAGAAACGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAAATGCTCATTGCAAGGTCGAACATCCTACGCATGGAATTTCTGGTTCTGAGTCTGCAACCGGTATTCATGCTGATTCTGGTAGCACCAAGGAAAAAAGTGTAACTGATAGTTGCACTAGTAAGAGGTTGGAAACTGACATGGGGAAAATGAGTCTTAAAAGTGATCAAAAGGACCCTAGCACTCCTAGTCTTCTAGTTGAGATTGCAGATCCAGTGGCAGATTTCAATGATAGGGTTTCTGTTTCCAATGAACGGGATCAACAAGCTTCATATGTCAGTTCAGAAAACCTGAATCCAAGATATTCTTGTGACATGGAAGGACCATCATTGGGTAATTCATTGCCTGATACAGATGGGATGAGAACATCGTGTTATGTTGAGATGCCTCTTGGTGCTGGAGCAACTGGTCTGGGAGCCACTGGAGTAGGTGTTGAAGGGCCATCTGAAGAAGGACCTTGCTACCATTTGGAGAACAATAGTTGGTTAGTTAGGGATCAATCAAGACATTGCTTTTCGTCGAATTCTTGTAATGAGCTCACATCTAGTGATTGGGGAAGATATGGAACACCTTTATTTTCATGGAATGGCCAGGTTCTTGGCAGAAGACAGCTTAAAGCTCACCCCAGAGGAAACTACAGAGGTCATGGAGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGATACATGCAAAGTTTGTTCCCTCATGAGTATGGCTTGCACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTTCTACAACTGGGTCGTACGTGCTAGAACATAATCAGAACATTATGCCTGGCAATGTGGGAAATATATATGTTGCTGAATCTTCTGCAGGCGAAAGAAATGGCCTTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCAGCATCTGCTTCACCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACCGAAACTATCCTCAGTCTGCAGCCAATGATGATTCAGAGGCACGTGCTGACCCCAATGGAGACCTGTCTGGAGATGGGTTGACAGCTTTAGTTGGGCTCAGCCTGGGAGGTAATAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACTGCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTACTTCTATATCACTGGATTTGAAAACACCTTTAAGCCATTTTCCCCCTTTTCGCTTTGGTGTATGTTTCGAGGATGTGCATAGGCTTGGTGATGGGCAGGTCAAGCATTCTCCAGAAGTTTTTTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGTTGTTTCTTCACCGTCGAAAGGCAGAGATAACTGATATACATAGAAAGGTGCATATGTATGTTGACTCGCGTGAAAAGGTGACTGCACGCTACCAGTTGACTGTCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAGGGATGGGGATGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTTTAG 2628 0.4475 MCSSFSMEEPQYREHPKAKITTIPPPQQHSDGATAELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDDAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKNAHCKVEHPTHGISGSESATGIHADSGSTKEKSVTDSCTSKRLETDMGKMSLKSDQKDPSTPSLLVEIADPVADFNDRVSVSNERDQQASYVSSENLNPRYSCDMEGPSLGNSLPDTDGMRTSCYVEMPLGAGATGLGATGVGVEGPSEEGPCYHLENNSWLVRDQSRHCFSSNSCNELTSSDWGRYGTPLFSWNGQVLGRRQLKAHPRGNYRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMSMACTCQKQFAFSHGASTTGSYVLEHNQNIMPGNVGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSEARADPNGDLSGDGLTALVGLSLGGNNGTNVHTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWDNVNSTSISLDLKTPLSHFPPFRFGVCFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLTVPSKREMMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00369 875 MobiDBLite consensus disorder prediction 277 295 - -
Pumo4g00369 875 SMART BTB_4 62 162 IPR000210 GO:0005515
Pumo4g00369 875 Gene3D Potassium Channel Kv1.1; Chain A 36 195 IPR011333 -
Pumo4g00369 875 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 17 875 - -
Pumo4g00369 875 MobiDBLite consensus disorder prediction 252 304 - -
Pumo4g00369 875 ProSiteProfiles BTB domain profile. 62 132 IPR000210 GO:0005515
Pumo4g00369 875 MobiDBLite consensus disorder prediction 627 648 - -
Pumo4g00369 875 MobiDBLite consensus disorder prediction 255 276 - -
Pumo4g00369 875 SUPERFAMILY POZ domain 56 160 IPR011333 -
Pumo4g00369 875 Pfam BTB/POZ domain 56 160 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo4g00369 BTB 1.6e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00369 - - gmx:100806711 1667.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00369 4 5023985 5030096 Pumo4g00369 4 5023985 5030096 ECH