Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00344 ATGTTGAAATTTCACACCCACAGAACTGTTGTTTGCGCCAAGGGTTTGACATTCACAACCCTAAAATGGAACCCTCTTGTCCAACTCCAATTTCTGAAATTGGAGTTCTGCACTGCCACCTCCAACCGACGCTCTTTCGTGGTGCCCTACCTCATCAACAATTGTGGCTTCTCCCAAGAAAACACTCTCAAAGCTTCCCTCAAGCTCCGTTTCCGTGACCCCCAAAATCCCGATTCGGTTTTCTCCTTCTTCCGAAACCACGGCTTCTCCAACTCTCAAATATGCCATATCCTTCAAAGAGAACTCCAGCTACTTTCATGCAACACCCAAAAGGTACTGTTGCCAAAGTTCCATTTTTTACGTTCAAAAGGTGCTTCTTCCCTTGACATTGTTCGCATGGTCACCACTTTCCCTTGTTTCCTTACAAGAAGCTTCGCGAATCATATAATCCCAACATATGAATTTGTAAGAGGCTTCCTCCTATCTGACAAGCGAGTCATTCTTCTTCTCATTCCCAATCCCTATTTACTTTCTGATGATCGTTTCAATTTTGTTATTGTGTTTCAGGAGCAACATGCATCATATGCAGAGAGATGGATGGATTCATGTCAAATATCCTCAGGAATTATGGGAATGGAATGCTTCTTGAGTTTTAACATTTTCACCCTTTGGAAAGTGACTTTTAGTGAGCTTCAACTCCAAGATGGGCCAAACACAGAACAACTCTTAAGTGAGATAAAGATTGAAGCTCAACTGGTTTTGTTTACCATTGAAAAAGAACTTGGCATCTATGAAGCACTAATTTCGACACGGACACTGGGACTAATCACGGACATTGGAACACGGCTAATGTCCAAAATATATGAAGCTATTCAAATCAATGAATTCCCATGCTGCAGATCAATAGGCCTGCAGATCAAAATATGTGTGAAGGGTGGGAATCCTCTACTTGTTACCACCAAGGAGTATTGCAATGATCAGCAACTATTGTCGGGGGAATGTTATCCTTGCAGAAAAAGTTTGTTCAACCACATCTCCAATTAA 1044 0.4176 MLKFHTHRTVVCAKGLTFTTLKWNPLVQLQFLKLEFCTATSNRRSFVVPYLINNCGFSQENTLKASLKLRFRDPQNPDSVFSFFRNHGFSNSQICHILQRELQLLSCNTQKVLLPKFHFLRSKGASSLDIVRMVTTFPCFLTRSFANHIIPTYEFVRGFLLSDKRVILLLIPNPYLLSDDRFNFVIVFQEQHASYAERWMDSCQISSGIMGMECFLSFNIFTLWKVTFSELQLQDGPNTEQLLSEIKIEAQLVLFTIEKELGIYEALISTRTLGLITDIGTRLMSKIYEAIQINEFPCCRSIGLQIKICVKGGNPLLVTTKEYCNDQQLLSGECYPCRKSLFNHISN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00344 347 Pfam mTERF 82 171 IPR003690 GO:0003690|GO:0006355
Pumo4g00344 347 Gene3D Transcription termination factor 3, mitochondrial 50 190 IPR038538 -
Pumo4g00344 347 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Pumo4g00344 347 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Pumo4g00344 347 PANTHER CGI-12 PROTEIN-RELATED 44 180 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00344 Pumo-Chr4 4808667 4811675 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo4g00344 mTERF 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00344 K15032 - gmx:102667698 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00344 4 4808667 4811675 Pumo4g00344 4 4808667 4811675 ECH