Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00337 ATGGCTCCTTCTAGGAAATCTAGAAGTGTAAATAAGAGGTTTTCTACTGTTCGTGAGGCTACATCTAGTAAAGACAAAATTGCAGAGAATGCTAGCAAAAATAGGCTGAAGGCAAGTCCTGGTATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGGCCACAATGGAATAAGGAGGAGCTTGAGCATTTCTATGAAGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGATCTGTGGAAATGGTAGAGGCCCTGTACACTATGAACAGGGCATATTTATCTCTTCCAGAGGGTACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCATTATAGTGTTCTGGGAGGAAGTGACAGTGGTAAAGAAAGCAATGACGATGCAGAAATATCTAAAAAGTCTCAAAAGCGTTTGCGGGGAAAGCATCTAAGTGACAGTAAAGCATTAGAAGGGCACTTTTCAGATCATTCTCAGTCACATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGACATTCTGGAATTAGGCCTCATGCTGTTCGAAAAAGGACTCCCCGTGTCCCTATTTCATATTCTATTGGTAAAGATAATGGGGATAGGTTTTTTTCATCTGCCAGGCAGGGCTCCAAACAAATGGTTGATACTAATGATGTTGCTCATAAGATTGCATTAGCATTGACAGAGGCTTCACAAAGAGGTGGCTCTTCGAAAATTTCTGGATCACCAGACAAAAAATTTGTGCCTTCACCAGGTCTGAAAAGTGGGAAGAAGCATCCTAAATCAGAAATAGCTGGAGCCAAGTTTTGCAGTTCTGACTTGGATGATGGTAGTTCTGAGTTGAGTTTAGGAAGCACAGAAGGTAATAATGAAGATTATTCTAGAAAAACAATTCATCGGAGTGGTAGAGAAAATACTGGAAGAGGAAGGAATCAAGAAAAGAAAATAAAACAATACAGGAAGAATTTAGAGCCAGAGGAGAATTTAAACAAGCATTTGAATGACATAAAGGAAGCCTCCAGTGGAACAGATGATGGCAAAAATCTCAGTTTTATCAAATCCAATTTTGACACAGGTTTTGCAGATGCAAAAAGTGCAAGGTCCTCTTACAAGGGTTCCAGGACGAAAAGTAAAAAGCTACTGTTGGAGAAAGATGAAGGTTCTGCTTTTGATGCTCTGAAAACTTTGGCTGATCTGTCTTTGATGCTGCCAGTAACAAACCCTGACACTGAGTCATCTGCACAGTTCAAGGAAGGAAACCATGATGTTGATGATGAATCTAAAATGGAAACACATAAAGTATTTCCTAGGATTGAAAGCACTGCTTCAAGTAAATTGGGCAAGGTTTTTTCTGATAATGGAACTGTTGTTCCTGAAGCAGAGGGAGCACACCAGCTTAATGCAGGAATCAGGAAAAGGAAACAAAAATCTTTTAACTTGAAAAACGATGAAACTCATACTGGTTCTCATTTAAGTGGTTCCCAGAAAACCAAGGCCACTGATGAGGTGAAGAAATCCATTGTTAAAGGTAAGCGGTCATCTGTTTCTACAGCACATTCAAGACAACTAAAAGGGATGAAATCCTCAGGAAATCTGTCTTCAAGCACTAATGACAAAGGGGAAAGGGATGATTCATCTTTTTCGCCAATGAAGGTTCCGTCAACAAATCAAGGCAGTCCATTAAACAGAGGAAAGCCAAGAAGAAAGATGGAAAAACCAAAACCAATGGTACAACAAGATTCGGTGGTGTCTAGAAATATTTTTAGCAGTCAACATAATAAATCCATTGCCTCACTCCAAGATGGCTCTTCTAGTCAAAAGGGAAAGCTTATCAATTGCCTGTCTTCATATCAAATGCGGCGATGGTGCACTTTTGAGTGGTTTTATAGTGCTATCGATTACCCATGGTTTTCAAAGAGAGAGTTTGTGGAGTACTTAGACCATGTTGGATTGGGTCATGTTCCTAGATTGACTCGTATTGAGTGGGGTGTCATTCGAAGTTCTCTTGGCAGACCACGAAGATTTTCTGAGCAATTTTTGATAGAAGAAAAACATAAACTTAATCAATACCGGGAATCTGTTAGATCACATTATGCTGAAATTCTTGCTGGTACCAAGGAAGGACTTCCTACTGATTTGGCCCAGCCTTTAATTGTTGGGCAGCGTGTTATTGCTATTCATCCAAAGACGAGAGAGATTCATGATGGAAGTGTACTAACTGTTGACCACTGTAGGTATAGGGTTCAGTTTGACCAGCCTGAACTTGGGGTTGAATTTGTCATGGATATTGACTGCATGCCTTTGTATCCATTTGAAAATATGCCTACATCTCTGATACAACACAATATCTCTTCTGCTCAAATAAATGAGAACTTTATTGAGCTCAAGCCTAATGGAAAACTGAAACAGAGAAAGGTTGCTGGGCACACAATATTGTCCCCTAGTGAGAACTCGGATACCATAAAAAATTTTCATATATCCCCCACTATGCATGGAAACAGTGCTTTATCAAAACAGGTTTTTTCTTCAAGCTCCAAATCACAACCGAAAGTTGTGTGCGGTGAGATTGGTAATGCCCAACTAGCATCAAGTTCTCAACCTTCCCTTCTTGAACATGTCCATTCAAAAGAAGCTGACATATTAGCTATTTCAGAGTTGAATCGTGCTCTAGACAAAAAGGAACTTGTATTGTCTGAACTGAAGCACATGAATGATGGGGTATCAGAGAGCCAGAAATTTGGAGACAACTCAGTAAAGGATTCAGAACCTTTTAAGAGGAATTATGCTTCAGTACTAAAGCAATTAACTGAAGCAAATGAACAGGTTTCTTCTGCCTTGTTTTGCTTGAGGCAACGCAACACATATCAAGCAAGCTCCTCTGTTTTGTCATTAAAGCCCATGGCTAATTTTGATGATCCTGGTGGTCAGGCCAGCTCTTCCAATTGTTCGGCTTGCCACAACCAAGAATCTATATCTCAAAGCCATATAGCTGAGATTGTTGAAAGTTCTAGAAGAAAAGCAAGAACAATGGTTGTTCAAGCTACGCAGGCAATGTCAAATTTAAGAAAGATGGAAAGTAAGGTTGAAAGAATTGAGGATGCAATAAATTTTATCAATAACCAGCTTTCAGTGGACGAACCTACTGCTTCAGCCACAACATTTCTGCCTGCAGATTCTTTTTCTCTGGCTTCTCAGGATCAATTGACTGCCAGTGTATTAAATCCCTTGGCAAGTTGTCATGTACAAGATGCTGAACTTAACAGTTCATCTGATCAAAATGAAATGAAAATTCCCTCAGAACTCATATCTCATTGCCTAGCTACATTGTTCATGATTCAGAAGTGTACAGAACGACAATTTCCCCCAGCTGATGTTGCTCAGGTACTAGATTCTGCTGTCACCAGTTTGCAGCCATTATCTTCAAAGAATCTTCCAATATATGGTGAGATACAGAAATGCATGGGCATCATAAGAAATCAGATATTGGCTCTCATACCTACATAG 3540 0.3977 MAPSRKSRSVNKRFSTVREATSSKDKIAENASKNRLKASPGIQKKRKLADMLGPQWNKEELEHFYEAYRKYGKDWKKVALAVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNDDAEISKKSQKRLRGKHLSDSKALEGHFSDHSQSHSVASGDGCLSLLKKRHSGIRPHAVRKRTPRVPISYSIGKDNGDRFFSSARQGSKQMVDTNDVAHKIALALTEASQRGGSSKISGSPDKKFVPSPGLKSGKKHPKSEIAGAKFCSSDLDDGSSELSLGSTEGNNEDYSRKTIHRSGRENTGRGRNQEKKIKQYRKNLEPEENLNKHLNDIKEASSGTDDGKNLSFIKSNFDTGFADAKSARSSYKGSRTKSKKLLLEKDEGSAFDALKTLADLSLMLPVTNPDTESSAQFKEGNHDVDDESKMETHKVFPRIESTASSKLGKVFSDNGTVVPEAEGAHQLNAGIRKRKQKSFNLKNDETHTGSHLSGSQKTKATDEVKKSIVKGKRSSVSTAHSRQLKGMKSSGNLSSSTNDKGERDDSSFSPMKVPSTNQGSPLNRGKPRRKMEKPKPMVQQDSVVSRNIFSSQHNKSIASLQDGSSSQKGKLINCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKHKLNQYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCRYRVQFDQPELGVEFVMDIDCMPLYPFENMPTSLIQHNISSAQINENFIELKPNGKLKQRKVAGHTILSPSENSDTIKNFHISPTMHGNSALSKQVFSSSSKSQPKVVCGEIGNAQLASSSQPSLLEHVHSKEADILAISELNRALDKKELVLSELKHMNDGVSESQKFGDNSVKDSEPFKRNYASVLKQLTEANEQVSSALFCLRQRNTYQASSSVLSLKPMANFDDPGGQASSSNCSACHNQESISQSHIAEIVESSRRKARTMVVQATQAMSNLRKMESKVERIEDAINFINNQLSVDEPTASATTFLPADSFSLASQDQLTASVLNPLASCHVQDAELNSSSDQNEMKIPSELISHCLATLFMIQKCTERQFPPADVAQVLDSAVTSLQPLSSKNLPIYGEIQKCMGIIRNQILALIPT 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 491 593 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 1 42 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 560 574 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 1 17 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 427 441 - -
Pumo4g00337 1179 PANTHER LIN-9 1 1179 IPR010561 GO:0006351|GO:0017053
Pumo4g00337 1179 SUPERFAMILY Homeodomain-like 52 99 IPR009057 -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 18 32 - -
Pumo4g00337 1179 FunFam Protein ALWAYS EARLY 3 isoform A 3 108 - -
Pumo4g00337 1179 Coils Coil 895 915 - -
Pumo4g00337 1179 Coils Coil 1026 1053 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 242 360 - -
Pumo4g00337 1179 ProSiteProfiles SANT domain profile. 51 88 IPR017884 -
Pumo4g00337 1179 SMART sant 52 100 IPR001005 -
Pumo4g00337 1179 CDD SANT 56 90 IPR001005 -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 522 548 - -
Pumo4g00337 1179 Pfam Myb-like DNA-binding domain 55 90 IPR001005 -
Pumo4g00337 1179 Gene3D - 3 108 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 304 354 - -
Pumo4g00337 1179 SMART DIRP_2 640 741 IPR033471 -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 287 303 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 127 153 - -
Pumo4g00337 1179 MobiDBLite consensus disorder prediction 422 441 - -
Pumo4g00337 1179 Pfam DIRP 639 740 IPR033471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00337 Pumo-Chr4 4728052 4743086 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo4g00337 DIRP 2.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00337 - - gmx:100781646 2132.45