Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00336 ATGAGAGGTAATTTTTCCGTTGGCCGTCCTCCGCATCGTGGTTGTGTTCTCCCGGCACACCCATCTGAAGAAGTTCATCACATTCCCAAGCCTACTAAGATCTCATCATCCTCCATTCCCCTTCAAATTCAGCAGTACCGTTTCCGACCCACACTCCTTCACAGTCTCCTACCTCGTCACCCACTGCGGCTTCTCCCCGGAAACCGCCCTCGCCACCTGCCGCAACCTCCGCTTGGACAGCCCCGAAAAACCAGACTCCGTCCGCGTCCTGGCCTTGTTCGGCAGCCAGGGCTTCTCCCTCTCCCAAATCCGCGAAATCATGAAACGCGAACACCGCATCCTCCCCAAGTTCCACTTCCTCCGCTCCAAAGGCGCCTCCACCTCCGACATGATCCGCATGGTCACCACCGGCCCAGGGTTCCTCTCTCGCTCCCTCGACAACCATATCGTCCCCGCCTACCAATTTATCCGAACCTTCCTCCCCTCCGACAAACTCATCATCCAATGCCTCAACCGCAACTCCTGTTTCATCTCCGACGCCCACCATCCTCCTCCACAACGGCGTCACTCATTCCAGCATTGCCAGGTTGCTCCACATGTGGCCATCCATTCTCTGCTCCTGTAACTTATCCGACACCGTTCAGGAACTCAAGCAATTGGCCTCCGACCACCACTTTCACCATCGCATTGCTCGCCAAAAGGACCGTCAATAAAACCATGTGGGCCGAGAAGGTTAAGGCCTACAAGAAGTGGGGCTGGTCCGAGGATGATGTTCTCGCCGCCTTTAAGAGGCATCCTTATTGTATGATGACGTCTCCTGATACGATCAATGCTGTCTTCAGCTTTTGGGTTAAGAAGTTGGGTGGGAGTTCCTTGGAGCTTGTCAAGTATCCTGTTCTTTTTCAGAAGAGGATTGCTCCCAGGGCTTCCGTTCTGCGCTTTCTTGCGCTGCAAGGTCTGAGGAAGGCGCGCGCCAGCATCGTCACGCCTTTTCTTATGACTCAGAAATCCTTCCTCGACAAGTTTGTCAAGCCTTATCAGAAGCATTCTGCCCAGTTGTTAAAGATGTATCAGGAAAATATGAATGTTGCCAATAGCAAGGAGAAGAAAAATACTTGCTTGTAG 1125 0.5307 MRGNFSVGRPPHRGCVLPAHPSEEVHHIPKPTKISSSSIPLQIQQYRFRPTLLHSLLPRHPLRLLPGNRPRHLPQPPLGQPRKTRLRPRPGLVRQPGLLPLPNPRNHETRTPHPPQVPLPPLQRRLHLRHDPHGHHRPRVPLSLPRQPYRPRLPIYPNLPPLRQTHHPMPQPQLLFHLRRPPSSSTTASLIPALPGCSTCGHPFSAPVTYPTPFRNSSNWPPTTTFTIALLAKRTVNKTMWAEKVKAYKKWGWSEDDVLAAFKRHPYCMMTSPDTINAVFSFWVKKLGGSSLELVKYPVLFQKRIAPRASVLRFLALQGLRKARASIVTPFLMTQKSFLDKFVKPYQKHSAQLLKMYQENMNVANSKEKKNTCL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00336 374 Pfam mTERF 238 338 IPR003690 GO:0003690|GO:0006355
Pumo4g00336 374 Gene3D Transcription termination factor 3, mitochondrial 227 356 IPR038538 -
Pumo4g00336 374 PANTHER CGI-12 PROTEIN-RELATED 225 347 IPR003690 GO:0003690|GO:0006355
Pumo4g00336 374 MobiDBLite consensus disorder prediction 63 119 - -
Pumo4g00336 374 MobiDBLite consensus disorder prediction 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00336 Pumo-Chr4 4721916 4724953 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo4g00336 mTERF 5.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00336 K15032 - gmx:100788877 204.912