Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00316 ATGCCTACTATGGCTGTGGAAGCATTGTACCAGAAACTAACCACAGTCATGACCTCTGATCATGCTTCCGTTGTCTCAATGAACCTTTTTGTTGCTCTTCTGTGCGCTTGCATCATCATCGGTCATTTGTTGGAGGAGAACCGATGGATCAATGAATCCATCACTGCCCTTCTCATTGGTCTCTGTACTGGGGTCTTTATATTGTTTACTACCGGAGGAAAAAGCTCTCATATACTAGTCTTCAGTGAAGATCTTTTCTTCATTTACCTTCTTCCACCCATTATTTTCAATGCCGGGTTTCAGGTGAAGAAAAAACAATTCTTCCGCAATTTTATGACTATAATGCTCTTTGGTGCAGTTGGTACTTTGATATCATTCTGCATCATATCACTAGGTGCCATACACTTTTTCCAGAAATTGGACATTGGTTCCCTCAAGATTGGAGATTTTCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACGTTGCAGGTTCTTAATCAGGATGAGACTCCTTTACTATATAGCCTGGTCTTTGGGGAGGGGGTAGTAAATGATGCTACCTCCGTAGTTCTCTTCAAAGCAATTCAGAATTTTGACCTCTCTCACATTGACTTAACCACCGCCTTACAGTTATTAGGAAATTTTTTGTATTTATTCATTGCAAGCACTGTGCTGGGAATCATTGCTGGATTGCTCAGTGCATTCATTATTAAGAAGCTCTATTTTGGCAAGTTGATAAGGCATTCTACAGACCGTGAGATTGCTCTCATGGTACTCATGGCTTACCTTTCATATATGCTATCTGAACTATTTTCTTTAAGTGCAATTCTGACTGTTTTCTTCTGCGGCATTGTTATGTCTCACTACACGTGGCATAATGTGACAGAAAGTTCAAGAGTGACAACCAAGCATGTCTTTGCCACTTTGTCATTCATTGCTGAAATCTTTATCTTCCTCTATGTGGGGATGGATGCATTAGACATAGAAAAGTGGCGAATTGTAAGTCAAAGCCCAAGAAAATCAATTGGGGTCAGTTCGTTGCTGTTGGCACTTATCTTAGTGGGAAGAGCTGCATTTGTTTTCCCTTTGTCCTTCTTATCCAACTTGCTTAAGAAGTCTCAATCTGAGAAAATTGAGTTAAAACAACAAGTAACAATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTTTCTATCGCACTTGCTTACAATCAGTTTACCAGGCTGGGCCATACTAAACTGCGTGAGAATGCCATCATGATCACTAGTACCATCACCGTTGTACTCTTCAGCACATTGGCGTTTGGGTTGATGACAAAGCCACTTGTGAGGTTATTGCTTCCTTCCTCTAAACATGTAACCAGCTTGCCGTCCCCACCATTGACACCGAAATCATTCACTGTGCCACTTCTTGGCAGTGGAGAGGATTCATCATGGTCCCAAAATGGGCCTCCACCAAGCACCTTAAGGATGCTCCTAAGCTGCATTCCTACTCGTGGGGTACACCACTATTGGCGCAAGTTTGATGATTCTGTCATGCGACCCGTCTTTGGTGGACGAGGTTTTGTACCCTACGTTCCCGGGTCACCCCTTGAACAAAGTGTTCATCAGTGGCATTGCATTTAG 1635 0.4251 MPTMAVEALYQKLTTVMTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIGLCTGVFILFTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLKIGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALQLLGNFLYLFIASTVLGIIAGLLSAFIIKKLYFGKLIRHSTDREIALMVLMAYLSYMLSELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKSQSEKIELKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPSSKHVTSLPSPPLTPKSFTVPLLGSGEDSSWSQNGPPPSTLRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQSVHQWHCI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00316 544 Gene3D - 146 198 - -
Pumo4g00316 544 PANTHER SODIUM/HYDROGEN EXCHANGER 18 520 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pumo4g00316 544 Pfam Sodium/hydrogen exchanger family 31 447 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo4g00316 544 Coils Coil 367 387 - -
Pumo4g00316 544 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo4g00316 544 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo4g00316 544 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo4g00316 544 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00316 Pumo-Chr4 4500565 4504915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00316 8 540 Antiporters AT3G05030 73.752 0.0 808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00316 4 4500565 4504915 Pumo4g00316 4 4500565 4504915 ECH