Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00290 ATGGGTTGTGTCCATGGCAAGTGTTGCTGTGGTGACGGTTCTTCATCAGATGATGGTTCTAGGGGTTACCGAGAACTTGGCTTCATTCATGGACACAGGAAGAACGTGCTCGCTCAGAGATCATTGAAGCATGTTCCTGTTCCTTCCCACAACTTCATTTTGGAATACACTTTTCTCACTCAGCGGGGGTACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTCTGCATTAGTACACAGCTCCAAGGTAACCCCAATGTTCATTTCTTTGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCGAATTTTGTTAAGGATAGGTTGGTAGAGAAGTTGTCAAATGACCCTGCATTGTTGGAGGACCCTGTTCAAACCTACAATTCTGCATTCTTGGCAACAAATCAAGAATTGCGTAGTACTAGTGAGATTGATGATTCTATGAGTGGCACCACCGCGATTACGGTGCTTGTTATTGGTGACACTCTTTATGTTGCTAATGTTGGTGATTCGAGAGCGGTGCTGGCTGTTAAGGATGGGGATCGCATTGTTGCTGAGGACCTATCCTCTGATCAGACGCCGTTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTCAAGGATCCAGATATCCAGAATTGGGGTGATGAAGAGAGTCGGGGTGGCGATCCTCCGAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTATAGGGGATAGTTTAGCGGAGACTATTGGTGTCATTGCTATTCCTGAGGTGAAAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTGGCAAGTGATGGCATATTTGAATTCCTGACAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATATGGATCCTCGTGATGCATGTGCGGCTATTGCAGAAAAATCATATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGTCTCTCTAATTCAGGTACATCTGGAATTGGATCAGATGAGACCAATGTTGGTACTGTAATGAATTCCAGGACAGGAACTCCTGAGATATCTGCTACCCCTGGATCTGATGTTTATCGTTCTGTCAGAACCAGTTTCTCTGATTTGCAATCCTGTCAGCACGTGGCTTCAGTGACGAGCTCAGCCATAGAGGTTCATTCTCCAGCATGTCCAAGACCAATTGAATGA 1269 0.4437 MGCVHGKCCCGDGSSSDDGSRGYRELGFIHGHRKNVLAQRSLKHVPVPSHNFILEYTFLTQRGYYPDSPDKENQDSFCISTQLQGNPNVHFFGVYDGHGQFGSQCSNFVKDRLVEKLSNDPALLEDPVQTYNSAFLATNQELRSTSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGDRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDIQNWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVIAIPEVKTVQLTPNHLFFVVASDGIFEFLTSQTVVDMAASYMDPRDACAAIAEKSYKLWLELENRTDDITIIIVQIKGLSNSGTSGIGSDETNVGTVMNSRTGTPEISATPGSDVYRSVRTSFSDLQSCQHVASVTSSAIEVHSPACPRPIE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00290 422 Gene3D - 54 348 IPR036457 -
Pumo4g00290 422 SMART PP2C_4 51 344 IPR001932 -
Pumo4g00290 422 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Pumo4g00290 422 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Pumo4g00290 422 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Pumo4g00290 422 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Pumo4g00290 422 CDD PP2Cc 71 346 IPR001932 -
Pumo4g00290 422 PANTHER PROTEIN PHOSPHATASE 73 345 IPR015655 GO:0004722|GO:0006470
Pumo4g00290 422 MobiDBLite consensus disorder prediction 225 244 - -
Pumo4g00290 422 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00290 Pumo-Chr4 4283794 4287541 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00290 1 351 PP2C-type Phosphatase Gene Family AT3G06270 71.388 7.06e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00290 - - gmx:100797866 790.801