Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00284 ATGGGTTGTGTCCATGGCAAGTGTTGCTGTGGTGACGGTTCTTCATCAGATGATGGTTCTAGGGGTTACCGAGAACTTGGCTTCATTCATGGACACAGGAAGAACGTGCTCGCTCAGAGATCATTGAAGCATGTTCCTGTTCCTTCCCACAACTTCATTTTGGAATACACTTTTCTCACTCAGCGGGGGTACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTCTGCATTAGTACACAGCTCCAAGGTAACCCCAATGTTCATTTCTTTGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCGAATTTTGTTAAGGATAGGTTGGTAGAGAAGTTGTCAAATGACCCTGCATTGTTGGAGGACCCTGTTCAAACCTACAATTCTGCATTCTTGGCAACAAATCAAGAATTGCGTAGTACTAGTGAGATTGATGATTCTATGAGTGGCACCACCGCGATTACGGTGCTTGTTATTGGTGACACTCTTTATGTTGCTAACGTTGGTGATTCGAGAGCAGTGCTGGCTGTTAAGGATGGGGATCGCATTGTTGCTGAGGACCTATCCTCTGATCAGACGCCGTTTCGAAGAGATGAATATGAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTCAAGGATCCAGATATCCAGAATTGGGGTGATGAAGAGAGTCGGGGTGGCGATCCTCCGAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTATAGGGGATAGTTTAGCGGAGACTATTGGTGTCATTGCTATTCCTGAGGTGAAAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTGGCAAGTGATGGCATATTTGAATTCCTGACAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATATGGATCCTCGTGATGCATGTGCGGCTATTGCAGAAAAATCATATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGTCTCTCTAATTCAGGTACATCTGGAATTGGATCAGATGAGACCAATGTTGGTACTGTAATGAATTCCAGGACAGGAACTCCTGAGATATCTGCTACCCCTGGATCTGATGTTTATCGTTCTGTCAGAACCAGTTTCTCTGATTTGCAATCCTGTCAGCACGTGGCTTCAGTGACGAGCTTAGCCATAGAGGTTCATTCTCCAGCATGTCCAAGACCAATTGAATGA 1269 0.4421 MGCVHGKCCCGDGSSSDDGSRGYRELGFIHGHRKNVLAQRSLKHVPVPSHNFILEYTFLTQRGYYPDSPDKENQDSFCISTQLQGNPNVHFFGVYDGHGQFGSQCSNFVKDRLVEKLSNDPALLEDPVQTYNSAFLATNQELRSTSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGDRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDIQNWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVIAIPEVKTVQLTPNHLFFVVASDGIFEFLTSQTVVDMAASYMDPRDACAAIAEKSYKLWLELENRTDDITIIIVQIKGLSNSGTSGIGSDETNVGTVMNSRTGTPEISATPGSDVYRSVRTSFSDLQSCQHVASVTSLAIEVHSPACPRPIE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00284 422 Gene3D - 54 348 IPR036457 -
Pumo4g00284 422 SMART PP2C_4 51 344 IPR001932 -
Pumo4g00284 422 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Pumo4g00284 422 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Pumo4g00284 422 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Pumo4g00284 422 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Pumo4g00284 422 CDD PP2Cc 71 346 IPR001932 -
Pumo4g00284 422 PANTHER PROTEIN PHOSPHATASE 73 345 IPR015655 GO:0004722|GO:0006470
Pumo4g00284 422 MobiDBLite consensus disorder prediction 225 244 - -
Pumo4g00284 422 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00284 Pumo-Chr4 4206081 4209824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00284 1 351 PP2C-type Phosphatase Gene Family AT3G06270 71.388 5.86e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00284 - - gmx:100797866 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00284 4 4206081 4209824 Pumo4g00284 4 4206081 4209824 ECH
Pumo4g00284 4 4206081 4209824 Pumo2g00454 2 7549880 7554100 PCT