Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00269 ATGCCGCATGATCAGAGAAAAAAGTCATCTGTAGATTTAGACTTCTTTACAGAATACGGTGAAGGGAGTAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTTATGGAATCTGATTTACATCAGGTTATCAAAGCAAATGATGATTTGACTCCAGAGCATTATCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTCGGTCTTGCCAGAGTGGCTTTCAATGATACGCCAACTGCTATATTTTGGACAGATTACGTTGCAACGAGGTGGTATAGAGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTAACTGGGAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCGTCTCCTGAAGCCATTGCTCGGGTACGGAATGAGAAAGCTCGGAGATACTTGAGTAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCCCAAAAGTTTCCTAATGTAGACCCCCTTGCTCTTCGTGTGTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGTAGAATAACAAAGGAAGACGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCGAAGATGTTAAAAGAACATCTAGAGGGAGCAGAGCCAACAGGATTCATGTATCCAAGGTACTATTATCCAAACCTGAACCAAAATTTCTGTTTCACTTCTCATTCTTTTGCATGA 1197 0.4052 MPHDQRKKSSVDLDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNVDPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEHLEGAEPTGFMYPRYYYPNLNQNFCFTSHSFA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00269 398 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pumo4g00269 398 FunFam Mitogen-activated protein kinase 111 339 - -
Pumo4g00269 398 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00269 398 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Pumo4g00269 398 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00269 398 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Pumo4g00269 398 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pumo4g00269 398 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pumo4g00269 398 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 335 - -
Pumo4g00269 398 CDD STKc_TDY_MAPK 24 361 - -
Pumo4g00269 398 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00269 398 FunFam Mitogen-activated protein kinase 15 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00269 Pumo-Chr4 3996558 4000492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00269 1 379 MAP Kinase Gene Family AT5G19010 93.931 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo4g00269 Pkinase 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00269 - - gmx:100799442 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00269 4 3996558 4000492 Pumo2g00434 2 7269433 7275712 PCT