Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00235 ATGACATCCTTAGTGAAGTACACAGGCACAGCATTGCCTCTGAGGAGCCCTGCTTCCTCAAGTCATGTTCCAAGGCCTCAACCCTGCACGTTGCCTTCTATCCACAATGTTCAACAAAGCAACCAACCCTCTCTCTCTTCCCTCAAACCTCTTTACATTTCATCCACTGAGAACTTTGCATTGTCACCAAAACTCAGAAGGAGGGTTACAGAGTGCCATGCCTATGAAGCAGATAGGTCACGGCCACTGGAGCTTAACATTGACGAACAAGCAGGGATAGAAGCAACTCAGAGGATCAAAATTGGTTTGTATTTTGCTATCTGGTGGGCTTTGAATGTGGTCTTCAACATATACAACAAGAAGGTTCTCAATGCCTTTCCTTACCCGTGGCTTACTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATGATGCTAGTCTCATGGGCCACAAGGGTTGCTGAGGTCCCAAAAGTTAATTTGGAGTTCTGGAAGGCTCTCTTTCCTGTTGCGGTGGCACATACAATTGGTCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCATTTACCCACATCATCAAGAGTGCAGAGCCTGCATTCAGTGTCCTGGTATCAAGTTTCTTGCTAGGGGAAGCATTCCCTGCGCAAGTTTACCTTTCACTGGTGCCAATTATAGGAGGTTGTGCACTTGCTGCCGTGACGGAGCTCAATTTCAATATGATTGGGTTTATGGGGGCTATGATTTCCAATTTGGCCTTTGTCTTTCGCAATATATTCTCAAAGAAGGGAATGAAAGGGATGGCTGTTAGTGGAATGAATTACTATGCTTGTCTTTCCATATTGTCTCTATTGATTCTCACGCCTTTTGCCATTGCTGTGGAGGGCCCAAAGATGTGGGCTGCAGGCTGGCAAACAGCCTTGTCTGAAATTGGTCCCAATTTTGTTTGGTGGGTAGCTGCCCAGAGTGTCTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTTGATCAGATATCTCCCTTGACATTCAGCATAGGGAATACAATGAAGAGAATTTCGGTGATTGTCTCTTCTATCCTTATCTTCCACACACCAATTCAGCCCGTCAATGCCCTAGGGGCGGCCATTGCAATTCTCGGTACCTTCCTCTATTCACAGGTACAATGTTGTTTCTTTTATTTTTGTTTACTTATACTGTATATTATCTGTCTGTTTGAGACAAATTCAAAGCAGTGA 1245 0.4474 MTSLVKYTGTALPLRSPASSSHVPRPQPCTLPSIHNVQQSNQPSLSSLKPLYISSTENFALSPKLRRRVTECHAYEADRSRPLELNIDEQAGIEATQRIKIGLYFAIWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWATRVAEVPKVNLEFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSAEPAFSVLVSSFLLGEAFPAQVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMAVSGMNYYACLSILSLLILTPFAIAVEGPKMWAAGWQTALSEIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIQPVNALGAAIAILGTFLYSQVQCCFFYFCLLILYIICLFETNSKQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00235 414 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 391 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pumo4g00235 414 PANTHER SOLUTE CARRIER FAMILY 35 100 391 - -
Pumo4g00235 414 Pfam Triose-phosphate Transporter family 100 388 IPR004853 -
Pumo4g00235 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00235 Pumo-Chr4 3485794 3489125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00235 35 391 Antiporters AT1G61800 79.444 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00235 K15283 K05350 gmx:100820126 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00235 4 3485794 3489125 Pumo4g00235 4 3485794 3489125 ECH
Pumo4g00235 4 3485794 3489125 Pumo2g00385 2 6714192 6717094 PCT