Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00209 ATGGTTGGCAGTGCTTACTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAGGAAATAGATATTTGGAGCGCAGGCATCATATTGTATATTCTTCTGAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTCAATGCCATATTGGAAGGTGAAATTGATTTTGTAAGTGAACCATGGCCATCCATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGCTGACACAGGATCCAAAGAAGCGGATTACTTCTGCTCAAGTCCTTGAACACCCATGGATGAGAGAAGGTGGAGACGCATCTGATAAACCAATCGATAGTGCAGTTCTATCCAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTAGCATTGAAGGTTATCGCTGAAAACCTATCAGAAGAGGAGATTAAAGGTCTCAAAGCAATGTTTGCAAATATGGACACTGACAATAGTGGCACCATCACCTATGAAGAACTGAAGACTGGCTTGGCTCGAATTGGATCAAGACTGTCCGAGGCTGAAGTGAAGCAACTCATGGATGCTGCTGATGTTGACGGAAATGGGTCAATTGACTATCTTGAATTCATTTCGGCTACAATGCATAGGCACAGACTTGAACGTGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGATAACAGTGGGTGTATTACAAGAGATGAATTAGAGACTGCTATGACTCAACATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATCTCTGAGGTGGATACAGATAATGATGGGAGAATAAACTATGAGGAATTCTGTGCAATGATGAGAAGCGGAGTGCCACACCAGGGGCAGCTACTTTAA 867 0.4164 MVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGEIDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGDASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDNSGTITYEELKTGLARIGSRLSEAEVKQLMDAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGCITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGVPHQGQLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00209 288 ProSiteProfiles EF-hand calcium-binding domain profile. 177 212 IPR002048 GO:0005509
Pumo4g00209 288 SUPERFAMILY Protein kinase-like (PK-like) 1 120 IPR011009 -
Pumo4g00209 288 ProSiteProfiles EF-hand calcium-binding domain profile. 213 248 IPR002048 GO:0005509
Pumo4g00209 288 ProSitePatterns EF-hand calcium-binding domain. 226 238 IPR018247 -
Pumo4g00209 288 Pfam EF-hand domain pair 216 278 IPR002048 GO:0005509
Pumo4g00209 288 Pfam EF-hand domain pair 146 206 IPR002048 GO:0005509
Pumo4g00209 288 FunFam Calcium-dependent protein kinase 1 106 281 - -
Pumo4g00209 288 Gene3D Transferase(Phosphotransferase) domain 1 1 102 - -
Pumo4g00209 288 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 273 - -
Pumo4g00209 288 FunFam Calcium-dependent protein kinase SK5 8 103 - -
Pumo4g00209 288 ProSiteProfiles EF-hand calcium-binding domain profile. 141 176 IPR002048 GO:0005509
Pumo4g00209 288 ProSiteProfiles EF-hand calcium-binding domain profile. 249 283 IPR002048 GO:0005509
Pumo4g00209 288 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00209 288 ProSitePatterns EF-hand calcium-binding domain. 154 166 IPR018247 -
Pumo4g00209 288 SMART serkin_6 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00209 288 Gene3D - 105 280 - -
Pumo4g00209 288 SMART efh_1 181 209 IPR002048 GO:0005509
Pumo4g00209 288 SMART efh_1 252 280 IPR002048 GO:0005509
Pumo4g00209 288 SMART efh_1 145 173 IPR002048 GO:0005509
Pumo4g00209 288 SMART efh_1 217 245 IPR002048 GO:0005509
Pumo4g00209 288 ProSitePatterns EF-hand calcium-binding domain. 261 273 IPR018247 -
Pumo4g00209 288 Pfam Protein kinase domain 2 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g00209 288 ProSitePatterns EF-hand calcium-binding domain. 190 202 IPR018247 -
Pumo4g00209 288 SUPERFAMILY EF-hand 137 277 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00209 Pumo-Chr4 2464042 2466897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00209 1 288 EF-hand Containing Proteins AT4G04720 84.429 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo4g00209 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00209 K13412 - gmx:100816859 568.54