Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00173 ATGGCAATATCGTTTCCTTGGATTCTGGTTGCCACAGTGGTCATGGCAATGCCGCTTTCATTTCACATAAAAGCAAACCAACTTTCTTACAGCTACTACAAGTTTTCATGCCCAAACTTGGAAAGCATAATCAAGAGTGAGTTGCTAAGCTTATTCTTGAATGATGCTACTGCACCAGCTGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAAGGATGTGATGCCTCAATTTTGTTGGACTCCAACTACCTCACTCACAGCTCTGAAATGGTTTCTTCAAGGAACTTTGGCATCAGAAAGCGGGAAACGATCAGCCACATAAAGTCGATATTAGAAGAAGAATGTCCGGGACAGGTGTCTTGTGCAGATATCATTGTCTTAGCTGCTAAGGAAGCAGTGTCATTCTCTGGAGGACCCCATATTGAGATCCCACTTGGAAGAAAAGACTCCAGAACTTGTAGTTTCCACGAGGCTGATGCTAAGCTTCCTTCACCAACAATAACCGTTGATGAATTTATATCCAATTTCATGTCTAAAGGAATGAACATTGAAGAGTCTGTTTCCATTTTAGGTAATGCATGTCAACCATAA 597 0.4171 MAISFPWILVATVVMAMPLSFHIKANQLSYSYYKFSCPNLESIIKSELLSLFLNDATAPAAFLRLMFHDCQVQGCDASILLDSNYLTHSSEMVSSRNFGIRKRETISHIKSILEEECPGQVSCADIIVLAAKEAVSFSGGPHIEIPLGRKDSRTCSFHEADAKLPSPTITVDEFISNFMSKGMNIEESVSILGNACQP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00173 198 Pfam Peroxidase 46 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 ProSiteProfiles Plant heme peroxidase family profile. 27 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 Gene3D Peroxidase, domain 2 165 194 - -
Pumo4g00173 198 SUPERFAMILY Heme-dependent peroxidases 27 193 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g00173 198 Gene3D - 32 164 - -
Pumo4g00173 198 PANTHER PEROXIDASE 25-RELATED 15 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00173 Pumo-Chr4 2134633 2135408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00173 12 193 Peroxidase AT3G03670 40.659 7.15e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00173 K00430 - gmx:100806951 347.051